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  5. LOC_Os01g36600.1

LOC_Os01g36600.1


Description : Pentatricopeptide repeat-containing protein At4g38150 OS=Arabidopsis thaliana (sp|q9szl5|pp356_arath : 251.0)


Gene families : OG_01_0010067 (Archaeplastida) Phylogenetic Tree(s): OG_01_0010067_tree ,
OG_02_0010093 (LandPlants) Phylogenetic Tree(s): OG_02_0010093_tree ,
OG_03_0008325 (SeedPlants) Phylogenetic Tree(s): OG_03_0008325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g36600.1
Cluster HCCA: Cluster_353

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00050920 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g38150... 0.03 Archaeplastida
AMTR_s00022p00050920 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g38150... 0.03 LandPlants
Gb_29332 No alias Pentatricopeptide repeat-containing protein At4g38150... 0.02 LandPlants
Solyc12g096140.3.1 No alias Pentatricopeptide repeat-containing protein At4g38150... 0.02 LandPlants
Zm00001e026388_P001 No alias Pentatricopeptide repeat-containing protein At4g38150... 0.02 LandPlants
AMTR_s00022p00050920 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g38150... 0.03 SeedPlants
AT4G38150 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 SeedPlants
Gb_29332 No alias Pentatricopeptide repeat-containing protein At4g38150... 0.02 SeedPlants
Solyc12g096140.3.1 No alias Pentatricopeptide repeat-containing protein At4g38150... 0.02 SeedPlants
Zm00001e026388_P001 No alias Pentatricopeptide repeat-containing protein At4g38150... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 176 201
IPR002885 Pentatricopeptide_repeat 204 253
No external refs found!