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MA_50550g0010


Description : auxin efflux transporter (PILS). auxin transporter (PILS)


Gene families : OG0000887 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000887_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_50550g0010
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01022301001 No alias Solute transport.carrier-mediated transport.BART... 0.02 OrthoFinder output from all 47 species
Gb_20670 No alias auxin efflux transporter (PILS). auxin transporter (PILS) 0.02 OrthoFinder output from all 47 species
Gb_31809 No alias auxin efflux transporter (PILS). auxin transporter (PILS) 0.02 OrthoFinder output from all 47 species
LOC_Os09g38130.1 LOC_Os09g38130 auxin efflux transporter (PILS). auxin transporter (PILS) 0.04 OrthoFinder output from all 47 species
Nbi_g16142 No alias auxin transporter *(PILS) & original description: none 0.03 OrthoFinder output from all 47 species
Smo115659 No alias Solute transport.carrier-mediated transport.BART... 0.03 OrthoFinder output from all 47 species
Solyc02g037550.3.1 Solyc02g037550 auxin efflux transporter (PILS). auxin transporter (PILS) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004776 Mem_trans 2 101
IPR004776 Mem_trans 124 295
No external refs found!