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  5. MA_4997g0010

MA_4997g0010


Description : transcription factor (Trihelix)


Gene families : OG0000970 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000970_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_4997g0010

Target Alias Description ECC score Gene Family Method Actions
AT3G11100 No alias sequence-specific DNA binding transcription factors 0.04 OrthoFinder output from all 47 species
AT3G24490 No alias Alcohol dehydrogenase transcription factor Myb/SANT-like... 0.04 OrthoFinder output from all 47 species
Ceric.38G051400.1 Ceric.38G051400 Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01017112001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.06 OrthoFinder output from all 47 species
LOC_Os01g52090.1 LOC_Os01g52090 transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species
Pnu_g07545 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c11_2240V3.1 Pp3c11_2240 sequence-specific DNA binding transcription factors 0.01 OrthoFinder output from all 47 species
Zm00001e032412_P001 Zm00001e032412 transcription factor (Trihelix) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!