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  5. MA_491742g0010

MA_491742g0010


Description : Nuclear pore complex protein NUP107 OS=Arabidopsis thaliana (sp|q8l748|nu107_arath : 111.0)


Gene families : OG0005850 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005850_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_491742g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00267150 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
AT3G14120 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.03 OrthoFinder output from all 47 species
Cre10.g425675 No alias No description available 0.03 OrthoFinder output from all 47 species
Dcu_g10818 No alias scaffold nucleoporin of nuclear pore complex *(NUP107) &... 0.03 OrthoFinder output from all 47 species
GSVIVT01016718001 No alias Nuclear pore complex protein NUP107 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os11g42420.1 LOC_Os11g42420 NUP107 scaffold nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
Lfl_g09527 No alias scaffold nucleoporin of nuclear pore complex *(NUP107) &... 0.02 OrthoFinder output from all 47 species
Ore_g16075 No alias scaffold nucleoporin of nuclear pore complex *(NUP107) &... 0.04 OrthoFinder output from all 47 species
Ppi_g32299 No alias scaffold nucleoporin of nuclear pore complex *(NUP107) &... 0.02 OrthoFinder output from all 47 species
Solyc12g049410.3.1 Solyc12g049410 NUP107 scaffold nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species
Zm00001e021094_P001 Zm00001e021094 NUP107 scaffold nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!