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  5. MA_49143g0010

MA_49143g0010


Description : no hits & (original description: none)


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_49143g0010

Target Alias Description ECC score Gene Family Method Actions
AT5G60970 TCP5 TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.04 OrthoFinder output from all 47 species
Aev_g30836 TCP10 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012107 ATTCP24, TCP24 TCP-type transcription factor & original description: CDS=1-672 0.06 OrthoFinder output from all 47 species
Dde_g13231 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01021528001 ATTCP24, TCP24 RNA biosynthesis.transcriptional activation.TCP... 0.02 OrthoFinder output from all 47 species
LOC_Os03g49880.1 TCP12, BRC2,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
LOC_Os08g33530.1 BRC1, ATTCP18,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Len_g11401 TCP5 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15709 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426407g0020 TCP13, TFPD, PTF1 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_3891g0010 TCP13, TFPD, PTF1 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Pir_g05279 TCP2 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g045030.2.1 TCP12, BRC2,... transcription factor (TCP) 0.1 OrthoFinder output from all 47 species
Zm00001e005909_P001 TCP2, Zm00001e005909 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e011911_P001 ATTCP24, TCP24,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Zm00001e022442_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 1 156
No external refs found!