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  5. MA_482767g0010

MA_482767g0010 (OTP84)


Aliases : OTP84

Description : Pentatricopeptide repeat-containing protein At1g20230 OS=Arabidopsis thaliana (sp|q9lnu6|ppr53_arath : 637.0)


Gene families : OG0000007 (OrthoFinder output from all 39 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_482767g0010
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01005196001 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.17 OrthoFinder output from all 39 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0018995 host cellular component IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 70 118
IPR002885 Pentatricopeptide_repeat 514 562
IPR002885 Pentatricopeptide_repeat 280 329
IPR002885 Pentatricopeptide_repeat 149 196
IPR002885 Pentatricopeptide_repeat 413 460
IPR002885 Pentatricopeptide_repeat 488 511
IPR002885 Pentatricopeptide_repeat 588 612
IPR002885 Pentatricopeptide_repeat 356 382
IPR002885 Pentatricopeptide_repeat 248 277
IPR032867 DYW_dom 687 811
No external refs found!