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  5. MA_470779g0010

MA_470779g0010 (ATCAT6, CAT6)


Aliases : ATCAT6, CAT6

Description : cationic amino acid transporter (CAT)


Gene families : OG0000575 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000575_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_470779g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00035p00052900 CAT5,... Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
AT1G17120 CAT8 cationic amino acid transporter 8 0.03 OrthoFinder output from all 47 species
Adi_g054487 AAT1, CAT1 cationic amino acid transporter *(CAT) & original... 0.02 OrthoFinder output from all 47 species
Aob_g34197 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Aop_g38961 ATCAT6, CAT6 cationic amino acid transporter *(CAT) & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01000682001 CAT8 Solute transport.carrier-mediated transport.APC... 0.08 OrthoFinder output from all 47 species
LOC_Os01g11160.1 CAT5, LOC_Os01g11160 cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
LOC_Os03g43970.1 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024695 CAT7 cationic amino acid transporter *(CAT) & original... 0.03 OrthoFinder output from all 47 species
Solyc02g070280.3.1 AAT1, CAT1,... cationic amino acid transporter (CAT) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR029485 CAT_C 497 547
IPR002293 AA/rel_permease1 53 461
No external refs found!