MA_46923g0010 (MBD10)

Aliases : MBD10

Description : methylation reader (MBD10-11)

Gene families : OG0000919 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000919_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_46923g0010
Cluster	HCCA: Cluster_69

Target	Alias	Description	ECC score	Gene Family Method
AT1G15340	MBD10	methyl-CPG-binding domain 10	0.04	OrthoFinder output from all 47 species
Adi_g058503	No alias	methylation reader *(MBD10-11) & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g16870	MBD10	methylation reader *(MBD10-11) & original description: none	0.03	OrthoFinder output from all 47 species
Smo437471	MBD10	Methyl-CpG-binding domain-containing protein 10...	0.03	OrthoFinder output from all 47 species
Solyc03g116680.3.1	MBD11, ATMBD11,...	methylation reader (MBD10-11)	0.03	OrthoFinder output from all 47 species
Solyc12g009590.2.1	MBD11, ATMBD11,...	methylation reader (MBD10-11)	0.03	OrthoFinder output from all 47 species
Spa_g30857	MBD11, ATMBD11	methylation reader *(MBD10-11) & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g33490	MBD11, ATMBD11	methylation reader *(MBD10-11) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0031047	RNA-mediated gene silencing	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	38	84

External Links

No external refs found!