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MA_45410g0010


Description : associated component SAP30 of histone deacetylase machineries


Gene families : OG0001072 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001072_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_45410g0010

Target Alias Description ECC score Gene Family Method Actions
Adi_g002827 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Adi_g077025 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Cre01.g051450 No alias Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
GSVIVT01009650001 No alias Chromatin organisation.histone modifications.histone... 0.03 OrthoFinder output from all 47 species
Ore_g01493 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Ore_g41852 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species
Pir_g60562 No alias associated component *(AFR) of histone deacetylase... 0.03 OrthoFinder output from all 47 species
Tin_g10450 No alias associated component *(AFR) of histone deacetylase... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR025718 SAP30_Sin3-bd 166 219
No external refs found!