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  5. AMTR_s00062p00065360

AMTR_s00062p00065360 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00062.38

Description : Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).LCNP NPQ-regulator lipocalin


Gene families : OG_01_0008039 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008039_tree ,
OG_02_0007871 (LandPlants) Phylogenetic Tree(s): OG_02_0007871_tree ,
OG_03_0008316 (SeedPlants) Phylogenetic Tree(s): OG_03_0008316_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00062p00065360
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
Gb_16780 No alias LCNP non-photochemical quenching regulator lipocalin 0.03 Archaeplastida
LOC_Os04g53490.1 No alias LCNP non-photochemical quenching regulator lipocalin 0.08 Archaeplastida
MA_11407g0010 No alias LCNP non-photochemical quenching regulator lipocalin 0.03 Archaeplastida
Mp4g07530.1 No alias LCNP non-photochemical quenching regulator lipocalin 0.02 Archaeplastida
Zm00001e006875_P002 No alias LCNP non-photochemical quenching regulator lipocalin 0.06 Archaeplastida
Gb_16780 No alias LCNP non-photochemical quenching regulator lipocalin 0.03 LandPlants
LOC_Os04g53490.1 No alias LCNP non-photochemical quenching regulator lipocalin 0.08 LandPlants
MA_11407g0010 No alias LCNP non-photochemical quenching regulator lipocalin 0.03 LandPlants
Mp4g07530.1 No alias LCNP non-photochemical quenching regulator lipocalin 0.02 LandPlants
Zm00001e006875_P002 No alias LCNP non-photochemical quenching regulator lipocalin 0.04 LandPlants
Gb_16780 No alias LCNP non-photochemical quenching regulator lipocalin 0.03 SeedPlants
LOC_Os04g53490.1 No alias LCNP non-photochemical quenching regulator lipocalin 0.06 SeedPlants
MA_11407g0010 No alias LCNP non-photochemical quenching regulator lipocalin 0.02 SeedPlants
Zm00001e006875_P002 No alias LCNP non-photochemical quenching regulator lipocalin 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000566 Lipocln_cytosolic_FA-bd_dom 104 264
No external refs found!