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  5. MA_44557g0010

MA_44557g0010 (CIP8)


Aliases : CIP8

Description : E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana (sp|q9spl2|cip8_arath : 154.0)


Gene families : OG0000101 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_44557g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00135070 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Adi_g003792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g008105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g088761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21468 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Aop_g01774 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.02G061800.1 Ceric.02G061800 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
Ceric.14G083100.1 Ceric.14G083100 not classified & original description: pacid=50633279... 0.03 OrthoFinder output from all 47 species
Ceric.16G066200.1 Ceric.16G066200 RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.04 OrthoFinder output from all 47 species
Ehy_g01134 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase &... 0.03 OrthoFinder output from all 47 species
GSVIVT01037379001 RHC1A Protein degradation.peptide tagging.Ubiquitin... 0.04 OrthoFinder output from all 47 species
Ore_g09253 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g114680.3.1 Solyc03g114680 E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Spa_g05859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
InterPro domains Description Start Stop
IPR001841 Znf_RING 79 120
No external refs found!