1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_44428g0010

MA_44428g0010 (SOC1, AGL20, ATSOC1)


Aliases : SOC1, AGL20, ATSOC1

Description : transcription factor (MADS/AGL)


Gene families : OG0000022 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_44428g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00267050 AGL6,... RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species
AMTR_s00071p00193200 STK, AGL11,... RNA biosynthesis.transcriptional activation.MADS box... 0.03 OrthoFinder output from all 47 species
AT5G60910 AGL8, FUL AGAMOUS-like 8 0.03 OrthoFinder output from all 47 species
Als_g44649 AGL6 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g38427 AGL9, SEP3 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g42778 AGL2, SEP1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g06265 AGL15 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04433 SOC1, AGL20, ATSOC1 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g12724 AGL16 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19342 AGL8, FUL MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25491 AGL8, FUL MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_34101 SVP, AGL22 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os08g41950.1 AGL9, SEP3,... transcription factor (MADS/AGL) 0.02 OrthoFinder output from all 47 species
Lfl_g38730 AGL8, FUL not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10232726g0010 AGL2, SEP1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_25342g0010 AGL16 transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
MA_6544g0010 STK, AGL11 Floral homeotic protein AGAMOUS OS=Panax ginseng... 0.05 OrthoFinder output from all 47 species
MA_770623g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_78010g0010 SHP2, AGL5 transcription factor (MADS/AGL) 0.04 OrthoFinder output from all 47 species
MA_9841429g0010 AGL9, SEP3 transcription factor (MADS/AGL) 0.03 OrthoFinder output from all 47 species
Pnu_g09567 AGL16 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g09891 AGL66 MADS/AGL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28969 AGL104 MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo69980 AGL67 RNA biosynthesis.transcriptional activation.MADS box... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 41 88
No external refs found!