LOC_Os07g06950 (Os07g0163800)


Aliases : Os07g0163800

Description : 29.5.11 protein.degradation.ubiquitin ubiquitin-specific protease 13 (UBP13)


Gene families : OG_01_0001043 (Gene family) Phylogenetic Tree(s): OG0001043_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os07g06950
Cluster HCCA cluster: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT3G11910 UBP13 ubiquitin-specific protease 13 0.04 Gene family
AT5G06600 UBP12 ubiquitin-specific protease 12 0.05 Gene family
GSVIVT01034603001 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.02 Gene family
GSVIVT01037528001 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.02 Gene family
MA_10426331g0010 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.03 Gene family
MA_10427483g0010 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.04 Gene family
MA_10427483g0020 No alias 29.5.11 protein.degradation.ubiquitin ubiquitin-specific... 0.02 Gene family
MA_10428769g0010 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.04 Gene family
Smo444302 PACid_15415833 No description available 0.03 Gene family
Solyc11g071700.2.1 Solyc11g071700.2 29.5.11 protein.degradation.ubiquitin ubiquitin-specific... 0.02 Gene family
Zm00001d018859 GRMZM2G018508 29.5.11 protein.degradation.ubiquitin ubiquitin-specific... 0.13 Gene family
Zm00001d023640 GRMZM2G303655,... 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.06 Gene family
Zm00001d043312 GRMZM2G071441 29.5.11 protein.degradation.ubiquitin ubiquitin-specific... 0.05 Gene family
Zm00001d052943 GRMZM2G418232,... 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0016579 protein deubiquitination IEA InterProScan
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR029346 USP_C 768 976
IPR002083 MATH/TRAF_dom 2 82
IPR024729 USP7_ICP0-binding_dom 506 758
IPR001394 Peptidase_C19_UCH 119 402
No external refs found!