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  5. MA_42871g0020

MA_42871g0020 (PEN3, ABCG36, ATPDR8,...)


Aliases : PEN3, ABCG36, ATPDR8, ATABCG36, PDR8

Description : ABC transporter G family member 40 OS=Arabidopsis thaliana (sp|q9m9e1|ab40g_arath : 277.0)


Gene families : OG0000071 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000071_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_42871g0020
Cluster HCCA: Cluster_227

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00117010 PEN3, ABCG36,... Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
AT4G15233 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 OrthoFinder output from all 47 species
AT4G15236 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.04 OrthoFinder output from all 47 species
Aob_g28174 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene01661.t1 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g41199 PDR11, ATPDR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g76298 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Cre11.g467597 ATPDR3, PDR3 Solute transport.primary active transport.ABC... 0.01 OrthoFinder output from all 47 species
Ehy_g20185 ABCG40, PDR12,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_30095 PEN3, ABCG36,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
LOC_Os08g43120.1 PDR11, ATPDR11,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
LOC_Os11g37700.1 PDR11, ATPDR11,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Len_g44430 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.06 OrthoFinder output from all 47 species
Len_g47391 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.07 OrthoFinder output from all 47 species
Mp1g25350.1 ATPDR7, PDR7 subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g03220 PEN3, ABCG36,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20722 ABCG40, PDR12,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g34956 ABCG40, PDR12,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14833 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g38915 ATPDR7, PDR7 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57903 PDR6, ATPDR6 subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07220 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12436 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50121 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Smo235359 PDR6, ATPDR6 Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
Solyc01g101070.3.1 PIS1, ABCG37,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc09g091670.3.1 ABCG40, PDR12,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Solyc12g019620.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Solyc12g100180.2.1 ABCG40, PDR12,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species
Spa_g56833 PDR11, ATPDR11 subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e006460_P001 PDR11, ATPDR11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Zm00001e019932_P002 PEN3, ABCG36,... subfamily ABCG transporter 0.06 OrthoFinder output from all 47 species
Zm00001e026148_P001 PDR6, ATPDR6,... subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Zm00001e030669_P001 PEN3, ABCG36,... subfamily ABCG transporter 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 2 160
No external refs found!