LOC_Os01g27520.1


Description : asparagine-tRNA ligase


Gene families : OG_01_0001509 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001509_tree ,
OG_02_0002604 (LandPlants) Phylogenetic Tree(s): OG_02_0002604_tree ,
OG_03_0002618 (SeedPlants) Phylogenetic Tree(s): OG_03_0002618_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g27520.1
Cluster HCCA: Cluster_382

Target Alias Description ECC score Gene Family Method Actions
Mp1g06990.1 No alias asparagine-tRNA ligase 0.04 Archaeplastida
Zm00001e026308_P001 No alias asparagine-tRNA ligase 0.06 Archaeplastida
Mp1g06990.1 No alias asparagine-tRNA ligase 0.04 LandPlants
Zm00001e026308_P001 No alias asparagine-tRNA ligase 0.06 LandPlants
GSVIVT01006160001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 SeedPlants
GSVIVT01015254001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 SeedPlants
Zm00001e026308_P001 No alias asparagine-tRNA ligase 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004364 Aa-tRNA-synt_II 142 202
IPR004364 Aa-tRNA-synt_II 290 552
IPR000738 WHEP-TRS_dom 232 270
IPR004365 NA-bd_OB_tRNA 43 119
No external refs found!