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  5. MA_41906g0010

MA_41906g0010 (ATCCD1, CCD1, NCED1, ATNCED1)


Aliases : ATCCD1, CCD1, NCED1, ATNCED1

Description : Carotenoid 9,10(9,10)-cleavage dioxygenase 1 OS=Phaseolus vulgaris (sp|q94ir2|ccd1_phavu : 127.0)


Gene families : OG0000239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_41906g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00256590 CCD4, NCED4,... Zeaxanthin 7,8(7,8)-cleavage dioxygenase, chromoplastic... 0.02 OrthoFinder output from all 47 species
AMTR_s00092p00172590 evm_27.TU.AmTr_v1... Phytohormones.abscisic acid.synthesis.neoxanthin cleavage protein 0.08 OrthoFinder output from all 47 species
AT1G30100 ATNCED5, NCED5 nine-cis-epoxycarotenoid dioxygenase 5 0.02 OrthoFinder output from all 47 species
AT3G14440 NCED3, SIS7,... nine-cis-epoxycarotenoid dioxygenase 3 0.02 OrthoFinder output from all 47 species
Ala_g26901 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Als_g29909 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Aop_g28984 ATNCED9, NCED9 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g36988 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.01 OrthoFinder output from all 47 species
Aspi01Gene08012.t1 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Aspi01Gene54184.t1 ATCCD1, CCD1,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g48845 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.04 OrthoFinder output from all 47 species
Ehy_g12236 ATCCD1, CCD1,... EC_1.13 oxidoreductase acting on single donor with... 0.03 OrthoFinder output from all 47 species
Ehy_g19766 CCD4, NCED4 EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Len_g47883 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.05 OrthoFinder output from all 47 species
MA_450285g0010 ATCCD1, CCD1,... Carotenoid 9,10(9,10)-cleavage dioxygenase OS=Crocus... 0.08 OrthoFinder output from all 47 species
MA_90573g0010 CCD4, NCED4 carotenoid cleavage dioxygenase (CCD4) 0.02 OrthoFinder output from all 47 species
Mp3g20700.1 ATNCED5, NCED5 neoxanthin cleavage protein 0.02 OrthoFinder output from all 47 species
Ore_g18596 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.01 OrthoFinder output from all 47 species
Pir_g57367 NCED3, SIS7,... EC_1.13 oxidoreductase acting on single donor with... 0.02 OrthoFinder output from all 47 species
Smo441302 NCED3, SIS7,... No description available 0.07 OrthoFinder output from all 47 species
Smo91815 NCED3, SIS7,... Secondary metabolism.terpenoids.terpenoid... 0.02 OrthoFinder output from all 47 species
Solyc05g053530.1.1 NCED6, ATNCED6,... neoxanthin cleavage protein 0.02 OrthoFinder output from all 47 species
Solyc08g075480.4.1 CCD4, NCED4,... carotenoid cleavage dioxygenase (CCD4) 0.02 OrthoFinder output from all 47 species
Solyc08g075490.4.1 CCD4, NCED4,... carotenoid cleavage dioxygenase (CCD4) 0.03 OrthoFinder output from all 47 species
Zm00001e015574_P001 CCD4, NCED4,... carotenoid cleavage dioxygenase (CCD4) 0.04 OrthoFinder output from all 47 species
Zm00001e023318_P001 CCD4, NCED4,... carotenoid cleavage dioxygenase (CCD4) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 39 113
No external refs found!