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Aliases : LBD4
Description : transcription factor (AS2/LOB)
Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_41152g0010 | |
| Cluster | HCCA: Cluster_179 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00187850 | LBD2,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G06280 | LBD2 | LOB domain-containing protein 2 | 0.02 | OrthoFinder output from all 47 species | |
| AT1G65620 | AS2 | Lateral organ boundaries (LOB) domain family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G28500 | LBD11 | LOB domain-containing protein 11 | 0.02 | OrthoFinder output from all 47 species | |
| AT2G40470 | LBD15, ASL11 | LOB domain-containing protein 15 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G03760 | LBD20 | LOB domain-containing protein 20 | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g68836 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g69112 | LOB | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene12790.t1 | LBD4, Aspi01Gene12790 | AS2/LOB-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene25201.t1 | LBD25, Aspi01Gene25201 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene25203.t1 | LBD25, Aspi01Gene25203 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0076.g037915 | LBD20 | AS2/LOB-type transcription factor & original... | 0.1 | OrthoFinder output from all 47 species | |
| Ceric.14G090000.1 | LBD20, Ceric.14G090000 | AS2/LOB-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.20G046600.1 | Ceric.20G046600 | not classified & original description: pacid=50566224... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g39794 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g13342 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g20332 | LOB | AS2/LOB-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g43172 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g46319 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003546001 | LBD10 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01003547001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01004323001 | ASL1, LBD36 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01006269001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01016330001 | LBD11 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01018486001 | ASL1, LBD36 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01029979001 | LBD20 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032592001 | LBD27, SCP | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01032714001 | LBD15, ASL11 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01032752001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_08465 | LBD4 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_20676 | LBD1 | transcription factor (AS2/LOB) | 0.05 | OrthoFinder output from all 47 species | |
| Gb_23794 | LBD12, ASL5, PCK1 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_40684 | LBD11 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_40685 | LBD11 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g17810.1 | LBD11, LOC_Os03g17810 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g07510.1 | LBD18, LOC_Os10g07510 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g01550.1 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g01550.1 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g55694 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_16646g0010 | LBD27, SCP | transcription factor (AS2/LOB) | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g44922 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g08471 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g40723 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g42900 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g42913 | LBD27, SCP | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g43400 | LBD22 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g43402 | LBD22 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g09676 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g11808 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g19686 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Smo59642 | LBD20 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc01g091420.2.1 | LBD18, Solyc01g091420 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g086480.1.1 | LOB, Solyc02g086480 | transcription factor (AS2/LOB) | 0.05 | OrthoFinder output from all 47 species | |
| Solyc06g082310.3.1 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g045530.3.1 | LBD4, Solyc11g045530 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g010810.1.1 | LBD2, Solyc12g010810 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019686_P001 | LBD20, Zm00001e019686 | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e028582_P007 | AS2, Zm00001e028582 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e030195_P001 | LBD2, Zm00001e030195 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 1 | 41 |
| No external refs found! |