MA_40819g0010


Description : component RPL21 of LSU proteome component


Gene families : OG0001239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001239_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_40819g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00252940 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
AT1G09590 No alias Translation protein SH3-like family protein 0.03 OrthoFinder output from all 47 species
AT1G09690 No alias Translation protein SH3-like family protein 0.04 OrthoFinder output from all 47 species
Adi_g043900 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Adi_g126899 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g05077 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g09546 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Cba_g09458 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Ceric.07G094100.1 Ceric.07G094100 component *(eL21) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000640.5 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
Cre06.g278135 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Dac_g13798 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01001130001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
GSVIVT01033444001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.04 OrthoFinder output from all 47 species
Gb_09077 No alias component RPL21 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os03g04750.1 LOC_Os03g04750 component RPL21 of LSU proteome component 0.03 OrthoFinder output from all 47 species
LOC_Os10g32820.1 LOC_Os10g32820 component RPL21 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Mp6g01390.1 No alias component RPL21 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Msp_g03349 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.06 OrthoFinder output from all 47 species
Nbi_g06034 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Pp3c12_9320V3.1 Pp3c12_9320 Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Pp3c3_5550V3.1 Pp3c3_5550 Translation protein SH3-like family protein 0.02 OrthoFinder output from all 47 species
Sam_g15602 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Sam_g38886 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Solyc10g078960.2.1 Solyc10g078960 component RPL21 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Solyc10g080590.2.1 Solyc10g080590 component RPL21 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Spa_g29344 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Spa_g52174 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Tin_g29829 No alias component *(eL21) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Zm00001e000341_P001 Zm00001e000341 component RPL21 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e004623_P001 Zm00001e004623 component RPL21 of LSU proteome component 0.03 OrthoFinder output from all 47 species
Zm00001e012727_P001 Zm00001e012727 component RPL21 of LSU proteome component 0.04 OrthoFinder output from all 47 species
Zm00001e038963_P001 Zm00001e038963 component RPL21 of LSU proteome component 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005741 mitochondrial outer membrane IEP HCCA
CC GO:0005750 mitochondrial respiratory chain complex III IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP HCCA
MF GO:0008080 N-acetyltransferase activity IEP HCCA
BP GO:0009060 aerobic respiration IEP HCCA
BP GO:0015980 energy derivation by oxidation of organic compounds IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016410 N-acyltransferase activity IEP HCCA
BP GO:0019646 aerobic electron transport chain IEP HCCA
CC GO:0019867 outer membrane IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031966 mitochondrial membrane IEP HCCA
CC GO:0031968 organelle outer membrane IEP HCCA
CC GO:0045275 respiratory chain complex III IEP HCCA
BP GO:0045333 cellular respiration IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
CC GO:0098798 mitochondrial protein-containing complex IEP HCCA
CC GO:0098800 inner mitochondrial membrane protein complex IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR001147 Ribosomal_L21e 1 101
No external refs found!