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  5. MA_40517g0010

MA_40517g0010


Description : Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana (sp|q9smz2|pp347_arath : 339.0)


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_40517g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G08070 OTP82 Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
AT5G39350 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.01 OrthoFinder output from all 47 species
Ala_g16386 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g17514 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g24408 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24707 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g24743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27565 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g27561 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0007.g010584 No alias not classified & original description: CDS=134-2257 0.07 OrthoFinder output from all 47 species
Cba_g05246 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g11842 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g19911 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20030 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g25477 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g29381 VAC1, ECB2, ATECB2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Cba_g67745 No alias ssDNA-binding protein *(OSB) & original description: none 0.12 OrthoFinder output from all 47 species
Ceric.21G054700.1 CRR22, Ceric.21G054700 not classified & original description: pacid=50603698... 0.17 OrthoFinder output from all 47 species
Dcu_g43123 No alias ssDNA-binding protein *(OSB) & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g31029 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g21772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g60430.1 LOC_Os01g60430 RNA editing factor (MEF10) 0.08 OrthoFinder output from all 47 species
Len_g18561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07385 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Lfl_g07756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10139 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23171 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01677 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13553 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g28935 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g20413 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 123 170
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 88 120
IPR002885 Pentatricopeptide_repeat 197 222
IPR002885 Pentatricopeptide_repeat 263 291
No external refs found!