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Description : no hits & (original description: none)
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: MA_393170g0010 | |
| Cluster | HCCA: Cluster_99 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00203540 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| AT2G27940 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT2G46160 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G00305 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT4G30370 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G05280 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G06490 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g29027 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g34929 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g12490 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene13378.t1 | Aspi01Gene13378 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0048.g030554 | No alias | not classified & original description: CDS=1-690 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G091800.1 | Ceric.01G091800 | not classified & original description: pacid=50591615... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.01G113600.1 | ATL5, Ceric.01G113600 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G113700.1 | Ceric.01G113700 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.06G080900.1 | Ceric.06G080900 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G091300.1 | Ceric.09G091300 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.15G075700.1 | Ceric.15G075700 | not classified & original description: pacid=50639640... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.20G013600.1 | ATL5, Ceric.20G013600 | not classified & original description: pacid=50566012... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G021000.1 | Ceric.22G021000 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.36G022800.1 | Ceric.36G022800 | not classified & original description: pacid=50568753... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.38G004700.1 | Ceric.38G004700 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g07105 | BRH1 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g10852 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31595 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g38215 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g39871 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g40682 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g04602 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g06418 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01019530001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_05005 | BRH1 | E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_14778 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Gb_20666 | No alias | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Gb_28973 | BRH1 | Probable E3 ubiquitin-protein ligase RHA1A... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_28980 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g61470.1 | LOC_Os01g61470 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g57460.1 | LOC_Os02g57460 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os08g06090.1 | RHA3B, LOC_Os08g06090 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g30310.1 | LOC_Os10g30310 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Len_g00994 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| MA_132693g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_201864g0010 | RHA3A | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_222729g0010 | ATL2, TL2 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| MA_223372g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_37578g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_8556123g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g00299 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g32953 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g39132 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g38125 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g44351 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.06 | OrthoFinder output from all 47 species | |
| Pir_g50189 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g21587 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g46048 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0073.g017126 | No alias | not classified & original description: CDS=1-528 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g15426 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g20097 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g007230.2.1 | ATL2, TL2, Solyc06g007230 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc11g066510.3.1 | Solyc11g066510 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g087840.1.1 | Solyc12g087840 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g00996 | No alias | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g11104 | No alias | RING-H2-class ATL-subclass E3 ubiquiTin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014286_P001 | Zm00001e014286 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015449_P001 | Zm00001e015449 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e023260_P001 | Zm00001e023260 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e034025_P001 | RHA3A, Zm00001e034025 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e038229_P001 | Zm00001e038229 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003924 | GTPase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006308 | DNA catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |