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  5. MA_39123g0010

MA_39123g0010 (VCS)


Aliases : VCS

Description : Enhancer of mRNA-decapping protein 4 OS=Arabidopsis thaliana (sp|q9ltt8|vcs_arath : 145.0)


Gene families : OG0001030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001030_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_39123g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00131900 VCS,... RNA processing.RNA decay.deadenylation-dependent... 0.02 OrthoFinder output from all 47 species
AT3G13300 VCS Transducin/WD40 repeat-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g035997 VCS not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04893 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.03 OrthoFinder output from all 47 species
Ala_g11471 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.02 OrthoFinder output from all 47 species
Cba_g14873 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.02 OrthoFinder output from all 47 species
Cba_g27245 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.02 OrthoFinder output from all 47 species
Ceric.06G068900.1 VCS, Ceric.06G068900 scaffold component *(VCS) of mRNA decapping complex &... 0.02 OrthoFinder output from all 47 species
Ceric.33G025800.1 VCS, Ceric.33G025800 scaffold component *(VCS) of mRNA decapping complex &... 0.03 OrthoFinder output from all 47 species
Dac_g14564 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.02 OrthoFinder output from all 47 species
Dcu_g05835 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.02 OrthoFinder output from all 47 species
Dcu_g11716 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.02 OrthoFinder output from all 47 species
Ehy_g07938 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.02 OrthoFinder output from all 47 species
GSVIVT01006976001 VCS RNA processing.RNA decay.deadenylation-dependent... 0.05 OrthoFinder output from all 47 species
GSVIVT01014783001 VCS RNA processing.RNA decay.deadenylation-dependent... 0.04 OrthoFinder output from all 47 species
Gb_04906 VCS scaffold component VCS of mRNA decapping complex 0.03 OrthoFinder output from all 47 species
Gb_29284 VCS Enhancer of mRNA-decapping protein 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g49090.1 VCS, LOC_Os02g49090 scaffold component VCS of mRNA decapping complex 0.02 OrthoFinder output from all 47 species
LOC_Os06g19660.1 VCS, LOC_Os06g19660 scaffold component VCS of mRNA decapping complex 0.02 OrthoFinder output from all 47 species
MA_10427487g0020 VCS Varicose-related protein OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Msp_g14526 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.06 OrthoFinder output from all 47 species
Msp_g26178 VCR scaffold component *(VCS) of mRNA decapping complex &... 0.03 OrthoFinder output from all 47 species
Nbi_g01496 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.02 OrthoFinder output from all 47 species
Ore_g09332 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.02 OrthoFinder output from all 47 species
Ore_g36602 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.02 OrthoFinder output from all 47 species
Ppi_g10110 VCS scaffold component *(VCS) of mRNA decaPping complex &... 0.02 OrthoFinder output from all 47 species
Solyc10g005920.4.1 VCS, Solyc10g005920 scaffold component VCS of mRNA decapping complex 0.06 OrthoFinder output from all 47 species
Spa_g10517 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g10518 VCS not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g26758 VCS not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g37076 VCR not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24736 VCS scaffold component *(VCS) of mRNA decapping complex &... 0.03 OrthoFinder output from all 47 species
Zm00001e015689_P001 VCS, Zm00001e015689 scaffold component VCS of mRNA decapping complex 0.02 OrthoFinder output from all 47 species
Zm00001e015707_P001 VCS, Zm00001e015707 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!