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MA_3905g0010


Description : histone deacetylase (HDT/HD2)


Gene families : OG0002165 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002165_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_3905g0010
Cluster HCCA: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
Adi_g045241 HDT3, HD2C HD2-type histone deacetylase *(HD2/HDT) & original... 0.04 OrthoFinder output from all 47 species
Adi_g106676 HDT3, HD2C not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0245.g060013 No alias not classified & original description: CDS=211-1146 0.02 OrthoFinder output from all 47 species
Ceric.33G031600.1 HDA3, ATHD2A,... HD2-type histone deacetylase *(HD2/HDT) & original... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000388.65 ATFKBP53, FKBP53 Protein modification.protein folding and quality... 0.02 OrthoFinder output from all 47 species
Dde_g20303 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.02 OrthoFinder output from all 47 species
LOC_Os01g68160.1 LOC_Os01g68160 histone deacetylase (HDT/HD2) 0.02 OrthoFinder output from all 47 species
Msp_g19073 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g12444 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.02 OrthoFinder output from all 47 species
Solyc09g009030.4.1 HDA3, ATHD2A,... histone deacetylase (HDT/HD2) 0.03 OrthoFinder output from all 47 species
Tin_g14352 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20431 HDA3, ATHD2A, HDT1, HD2A HD2-type histone deacetylase *(HD2/HDT) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR041232 NPL 3 94
No external refs found!