MA_3891g0010 (TCP13, TFPD, PTF1)


Aliases : TCP13, TFPD, PTF1

Description : transcription factor (TCP)


Gene families : OG0000529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000529_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_3891g0010

Target Alias Description ECC score Gene Family Method Actions
Ala_g18903 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50266.t1 TCP2, Aspi01Gene50266 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0010.g012107 ATTCP24, TCP24 TCP-type transcription factor & original description: CDS=1-672 0.03 OrthoFinder output from all 47 species
GSVIVT01021528001 ATTCP24, TCP24 RNA biosynthesis.transcriptional activation.TCP... 0.03 OrthoFinder output from all 47 species
LOC_Os03g49880.1 TCP12, BRC2,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
MA_49143g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_78665g0010 TCP2 transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Msp_g48155 TCP3 TCP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g05279 TCP2 TCP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g26727 TCP13, TFPD, PTF1 TCP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g089020.2.1 TCP13, TFPD,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc02g089830.2.1 TCP1, Solyc02g089830 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc03g045030.2.1 TCP12, BRC2,... transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Solyc03g115010.3.1 TCP5, Solyc03g115010 transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc04g006980.1.1 TCP12, BRC2,... transcription factor (TCP) 0.02 OrthoFinder output from all 47 species
Solyc05g009900.3.1 TCP12, BRC2,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Solyc07g053410.4.1 TCP4, MEE35,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species
Zm00001e005909_P001 TCP2, Zm00001e005909 transcription factor (TCP) 0.04 OrthoFinder output from all 47 species
Zm00001e009811_P001 BRC1, ATTCP18,... transcription factor (TCP) 0.05 OrthoFinder output from all 47 species
Zm00001e011911_P001 ATTCP24, TCP24,... transcription factor (TCP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 102 277
No external refs found!