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  5. MA_38882g0010

MA_38882g0010


Description : histone (H4)


Gene families : OG0000254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000254_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_38882g0010
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00220160 evm_27.TU.AmTr_v1... Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
AT2G28740 HIS4 histone H4 0.02 OrthoFinder output from all 47 species
AT3G45930 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G46320 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G59690 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G59970 No alias Histone superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g068069 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05602 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g22329 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g28066 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18960.t1 Aspi01Gene18960 histone *(H4) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene30550.t1 Aspi01Gene30550 histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30988 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G005700.1 Ceric.05G005700 histone *(H4) & original description: pacid=50578064... 0.01 OrthoFinder output from all 47 species
Ceric.11G079500.1 Ceric.11G079500 histone *(H4) & original description: pacid=50595239... 0.02 OrthoFinder output from all 47 species
Ceric.12G065600.1 Ceric.12G065600 histone *(H4) & original description: pacid=50601973... 0.02 OrthoFinder output from all 47 species
Ceric.12G065700.1 Ceric.12G065700 histone *(H4) & original description: pacid=50601214... 0.02 OrthoFinder output from all 47 species
Ceric.12G080900.1 Ceric.12G080900 histone *(H4) & original description: pacid=50601464... 0.02 OrthoFinder output from all 47 species
Ceric.12G081100.1 Ceric.12G081100 histone *(H4) & original description: pacid=50601273... 0.02 OrthoFinder output from all 47 species
Ceric.14G089900.1 Ceric.14G089900 histone *(H4) & original description: pacid=50633501... 0.02 OrthoFinder output from all 47 species
Ceric.18G065500.1 Ceric.18G065500 histone *(H4) & original description: pacid=50622083... 0.02 OrthoFinder output from all 47 species
Ceric.28G045100.1 Ceric.28G045100 histone *(H4) & original description: pacid=50570632... 0.02 OrthoFinder output from all 47 species
Ceric.29G055000.1 Ceric.29G055000 histone *(H4) & original description: pacid=50624348... 0.02 OrthoFinder output from all 47 species
Ceric.38G017000.1 Ceric.38G017000 histone *(H4) & original description: pacid=50580621... 0.02 OrthoFinder output from all 47 species
Cre06.g264600 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g265050 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g265200 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g265450 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g266600 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g268000 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g268400 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g271300 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274150 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274300 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g274900 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g275700 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276650 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre06.g276800 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504600 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g504850 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g505450 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506350 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre12.g506450 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g708650 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
Cre17.g709100 No alias Chromatin organisation.histones.H4-type histone 0.02 OrthoFinder output from all 47 species
GSVIVT01034208001 No alias Chromatin organisation.histones.H4-type histone 0.01 OrthoFinder output from all 47 species
Gb_10374 No alias histone (H4) 0.04 OrthoFinder output from all 47 species
Gb_21914 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Gb_21918 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Gb_24017 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Gb_28215 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
LOC_Os02g45940.1 LOC_Os02g45940 histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os03g02780.1 LOC_Os03g02780 histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os05g39050.1 LOC_Os05g39050 histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os07g36500.1 LOC_Os07g36500 histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os09g26340.1 LOC_Os09g26340 histone (H4) 0.02 OrthoFinder output from all 47 species
LOC_Os09g38020.1 LOC_Os09g38020 histone (H4) 0.02 OrthoFinder output from all 47 species
Lfl_g24766 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10427181g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
MA_465285g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
MA_713159g0010 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
Mp4g13440.1 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Mp5g16840.1 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Mp5g22450.1 No alias histone (H4) 0.03 OrthoFinder output from all 47 species
Mp5g22460.1 No alias histone (H4) 0.02 OrthoFinder output from all 47 species
Pnu_g24668 No alias histone *(H4) & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c22_22340V3.1 Pp3c22_22340 histone H4 0.02 OrthoFinder output from all 47 species
Pp3c5_600V3.1 Pp3c5_600 Histone superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c7_22150V3.1 Pp3c7_22150 histone H4 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0038.g011995 No alias histone *(H4) & original description: CDS=1-312 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012615 No alias histone *(H4) & original description: CDS=1-477 0.04 OrthoFinder output from all 47 species
Smo233579 No alias Chromatin organisation.histones.H4-type histone 0.03 OrthoFinder output from all 47 species
Solyc04g011390.1.1 Solyc04g011390 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc05g054610.1.1 Solyc05g054610 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc06g005420.1.1 Solyc06g005420 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc06g005430.1.1 Solyc06g005430 histone (H4) 0.02 OrthoFinder output from all 47 species
Solyc06g072240.1.1 Solyc06g072240 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc06g075830.2.1 Solyc06g075830 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc06g075960.1.1 Solyc06g075960 histone (H4) 0.02 OrthoFinder output from all 47 species
Solyc11g066160.1.1 Solyc11g066160 histone (H4) 0.03 OrthoFinder output from all 47 species
Solyc11g072840.1.1 Solyc11g072840 histone (H4) 0.04 OrthoFinder output from all 47 species
Solyc11g072860.2.1 Solyc11g072860 histone (H4) 0.03 OrthoFinder output from all 47 species
Spa_g35494 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53626 No alias histone *(H4) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007138_P001 Zm00001e007138 histone (H4) 0.04 OrthoFinder output from all 47 species
Zm00001e009859_P001 Zm00001e009859 histone (H4) 0.02 OrthoFinder output from all 47 species
Zm00001e016816_P001 Zm00001e016816 histone (H4) 0.03 OrthoFinder output from all 47 species
Zm00001e025845_P001 Zm00001e025845 histone (H4) 0.03 OrthoFinder output from all 47 species
Zm00001e027269_P001 Zm00001e027269 histone (H4) 0.02 OrthoFinder output from all 47 species
Zm00001e034229_P001 Zm00001e034229 histone (H4) 0.03 OrthoFinder output from all 47 species
Zm00001e034964_P001 Zm00001e034964 histone (H4) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR035425 CENP-T/H4_C 36 96
No external refs found!