- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Pentatricopeptide repeat-containing protein At1g63080, mitochondrial OS=Arabidopsis thaliana (sp|q9can5|ppr98_arath : 304.0)
Gene families : OG0000142 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000142_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00205450 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g25210,... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00003p00209480 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00033p00156340 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g80550,... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00078p00045650 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g52640,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00119p00029960 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g15010,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00119p00084460 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At2g27800,... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00142p00073110 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At1g73400,... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G02420 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G74900 | OTP43 | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G16010 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.07 | OrthoFinder output from all 47 species | |
| AT3G60050 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G61360 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G15010 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G18390 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g058761 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g03187 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g08644 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g07419 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aob_g11133 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g15608 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene31661.t1 | Aspi01Gene31661 | group-II intron mitochondrial splicing factor *(MISF68)... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene40748.t1 | Aspi01Gene40748 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene46984.t1 | Aspi01Gene46984 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene59816.t1 | EMB2261, Aspi01Gene59816 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene63892.t1 | Aspi01Gene63892 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene63899.t1 | Aspi01Gene63899 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g10252 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g23699 | No alias | group-II intron mitochondrial splicing factor *(MISF68)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.24G045100.1 | Ceric.24G045100 | not classified & original description: pacid=50628969... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.25G036800.1 | Ceric.25G036800 | group-II intron mitochondrial splicing factor *(MISF68)... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000737.24 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020723.110 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
| Dac_g07022 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g07047 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g01694 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g04707 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g05532 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08151 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g09971 | No alias | group-II intron mitochondrial splicing factor *(MISF68)... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g32634 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g39023 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g17496 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01007280001 | No alias | Pentatricopeptide repeat-containing protein At3g49730... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008815001 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01010329001 | No alias | Pentatricopeptide repeat-containing protein At3g04130,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01015982001 | No alias | Pentatricopeptide repeat-containing protein At1g80880,... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01017111001 | No alias | Pentatricopeptide repeat-containing protein At3g16010... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01017293001 | No alias | Pentatricopeptide repeat-containing protein At1g52640,... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01022794001 | No alias | Pentatricopeptide repeat-containing protein At1g73400,... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01027388001 | No alias | Pentatricopeptide repeat-containing protein At1g80550,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_04017 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_06907 | No alias | Pentatricopeptide repeat-containing protein At1g80550,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_11871 | No alias | Pentatricopeptide repeat-containing protein At3g49730... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_13617 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_20376 | No alias | group-II intron mitochondrial splicing factor (MISF68) | 0.06 | OrthoFinder output from all 47 species | |
| Gb_20750 | No alias | Pentatricopeptide repeat-containing protein At5g64320,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_23459 | No alias | Pentatricopeptide repeat-containing protein At1g77360,... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_32987 | No alias | Pentatricopeptide repeat-containing protein At5g18390,... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os01g05860.1 | LOC_Os01g05860 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g52220.1 | LOC_Os02g52220 | Pentatricopeptide repeat-containing protein At1g73400,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g51840.1 | LOC_Os03g51840 | Pentatricopeptide repeat-containing protein At3g49730... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g28720.1 | LOC_Os05g28720 | Pentatricopeptide repeat-containing protein At3g62470,... | 0.02 | OrthoFinder output from all 47 species | |
| MA_128052g0010 | No alias | Pentatricopeptide repeat-containing protein At3g53700,... | 0.05 | OrthoFinder output from all 47 species | |
| MA_455059g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_8206159g0010 | No alias | Pentatricopeptide repeat-containing protein At5g15010,... | 0.04 | OrthoFinder output from all 47 species | |
| MA_929381g0010 | OTP43 | OTP43 mitochondrial RNA splicing factor | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g08820 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g08945 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g18059 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g14416 | PPR40 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0021.g008361 | No alias | not classified & original description: CDS=1-1977 | 0.03 | OrthoFinder output from all 47 species | |
| Smo126152 | No alias | Pentatricopeptide repeat-containing protein At1g09410,... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g112560.4.1 | Solyc03g112560 | Pentatricopeptide repeat-containing protein At1g80550,... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g116540.1.1 | Solyc03g116540 | Pentatricopeptide repeat-containing protein At1g52640,... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc03g117570.3.1 | Solyc03g117570 | Pentatricopeptide repeat-containing protein At1g80880,... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc04g076370.4.1 | Solyc04g076370 | Pentatricopeptide repeat-containing protein At2g27800,... | 0.05 | OrthoFinder output from all 47 species | |
| Solyc06g083200.3.1 | Solyc06g083200 | Pentatricopeptide repeat-containing protein At3g25210,... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g097840.2.1 | Solyc09g097840 | Pentatricopeptide repeat-containing protein At5g18390,... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc11g071670.2.1 | Solyc11g071670 | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
| Solyc12g043100.2.1 | Solyc12g043100 | group-II intron mitochondrial splicing factor (MISF68) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g47474 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g06924 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e005446_P003 | Zm00001e005446 | group-II intron mitochondrial splicing factor (MISF68) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e006773_P001 | Zm00001e006773 | Pentatricopeptide repeat-containing protein At1g80550,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013118_P001 | Zm00001e013118 | Pentatricopeptide repeat-containing protein At3g61360... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e025816_P001 | Zm00001e025816 | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026896_P001 | Zm00001e026896 | Pentatricopeptide repeat-containing protein At3g62470,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e028873_P001 | Zm00001e028873 | Pentatricopeptide repeat-containing protein At5g15010,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e036197_P001 | Zm00001e036197 | Pentatricopeptide repeat-containing protein At1g71060,... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 505 | 554 |
| IPR002885 | Pentatricopeptide_repeat | 435 | 484 |
| IPR002885 | Pentatricopeptide_repeat | 295 | 344 |
| IPR002885 | Pentatricopeptide_repeat | 365 | 414 |
| IPR002885 | Pentatricopeptide_repeat | 225 | 273 |
| IPR002885 | Pentatricopeptide_repeat | 575 | 622 |
| IPR002885 | Pentatricopeptide_repeat | 195 | 221 |
| IPR002885 | Pentatricopeptide_repeat | 158 | 185 |
| No external refs found! |