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  5. MA_37504g0010

MA_37504g0010


Description : CCT3 subunit gamma of CCT chaperonin folding complex


Gene families : OG0005075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_37504g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00176500 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.02 OrthoFinder output from all 47 species
AT5G26360 No alias TCP-1/cpn60 chaperonin family protein 0.07 OrthoFinder output from all 47 species
Adi_g087113 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Aev_g01274 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Ala_g14047 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Ceric.25G052600.1 Ceric.25G052600 subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000615.79 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 OrthoFinder output from all 47 species
Cre10.g443250 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.06 OrthoFinder output from all 47 species
Dac_g00874 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
Dcu_g06317 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.03 OrthoFinder output from all 47 species
GSVIVT01000266001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 OrthoFinder output from all 47 species
GSVIVT01007770001 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.04 OrthoFinder output from all 47 species
Gb_37345 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.03 OrthoFinder output from all 47 species
LOC_Os06g34690.1 LOC_Os06g34690 CCT3 subunit gamma of CCT chaperonin folding complex 0.06 OrthoFinder output from all 47 species
Len_g00631 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.04 OrthoFinder output from all 47 species
Mp7g14360.1 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species
Ore_g20439 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Pnu_g07386 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Pp3c10_13240V3.1 Pp3c10_13240 TCP-1/cpn60 chaperonin family protein 0.01 OrthoFinder output from all 47 species
Pp3c12_7550V3.1 Pp3c12_7550 TCP-1/cpn60 chaperonin family protein 0.03 OrthoFinder output from all 47 species
Ppi_g16740 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Sam_g15411 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Solyc05g056310.3.1 Solyc05g056310 CCT3 subunit gamma of CCT chaperonin folding complex 0.07 OrthoFinder output from all 47 species
Spa_g00971 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Tin_g01973 No alias subunit gamma *(CCT3) of CCT chaperonin folding complex... 0.02 OrthoFinder output from all 47 species
Zm00001e000822_P001 Zm00001e000822 CCT3 subunit gamma of CCT chaperonin folding complex 0.06 OrthoFinder output from all 47 species
Zm00001e024916_P001 Zm00001e024916 CCT3 subunit gamma of CCT chaperonin folding complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0030490 maturation of SSU-rRNA IEP HCCA
MF GO:0030515 snoRNA binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 13 352
No external refs found!