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  5. MA_37406g0010

MA_37406g0010


Description : Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa subsp. japonica (sp|q6k431|trx1_orysj : 113.0)


Gene families : OG0002734 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002734_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_37406g0010
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AT3G14740 No alias RING/FYVE/PHD zinc finger superfamily protein 0.07 OrthoFinder output from all 47 species
Aop_g14467 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.08G035800.1 Ceric.08G035800 not classified & original description: pacid=50638697... 0.1 OrthoFinder output from all 47 species
Dcu_g14797 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01014083001 No alias Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.1 OrthoFinder output from all 47 species
Gb_23341 No alias Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.19 OrthoFinder output from all 47 species
LOC_Os01g08820.1 LOC_Os01g08820 Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
Nbi_g06978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27295 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g062100.4.1 Solyc07g062100 Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Tin_g07715 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e016664_P001 Zm00001e016664 Histone-lysine N-methyltransferase TRX1 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006275 regulation of DNA replication IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!