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  5. MA_370291g0010

MA_370291g0010


Description : Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 337.0)


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_370291g0010

Target Alias Description ECC score Gene Family Method Actions
AT3G18950 No alias Transducin/WD40 repeat-like superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g023030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g00841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g22068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19060 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47008 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene05746.t1 Aspi01Gene05746 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23387.t1 Aspi01Gene23387 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G012600.1 Ceric.28G012600 not classified & original description: pacid=50570711... 0.02 OrthoFinder output from all 47 species
Dac_g26745 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g40515 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g19296 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007825001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01031882001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_14478 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Gb_26403 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_26404 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g13140.1 LOC_Os01g13140 Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os03g52870.1 LOC_Os03g52870 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g56910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34011 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g14258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g42519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g25659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g08501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g62350 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0113.g020851 No alias not classified & original description: CDS=1-1557 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0223.g026269 No alias not classified & original description: CDS=1-1944 0.03 OrthoFinder output from all 47 species
Solyc01g109120.3.1 Solyc01g109120 Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc03g111780.1.1 Solyc03g111780 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc04g005020.3.1 Solyc04g005020 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc07g025140.4.1 Solyc07g025140 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc12g044320.2.1 Solyc12g044320 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g06919 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g48688 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Zm00001e007790_P001 Zm00001e007790 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e015781_P001 Zm00001e015781 Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 328 362
IPR001680 WD40_repeat 244 272
IPR001680 WD40_repeat 379 409
IPR001680 WD40_repeat 277 313
No external refs found!