LOC_Os01g23620.1


Description : GTPase (Sar1)


Gene families : OG_01_0001825 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001825_tree ,
OG_02_0001675 (LandPlants) Phylogenetic Tree(s): OG_02_0001675_tree ,
OG_03_0001948 (SeedPlants) Phylogenetic Tree(s): OG_03_0001948_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g23620.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00037810 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 Archaeplastida
AT1G56330 SAR1, ATSAR1B,... secretion-associated RAS 1B 0.05 Archaeplastida
MA_14388g0010 No alias GTPase (Sar1) 0.03 Archaeplastida
Mp2g15910.1 No alias GTPase (Sar1) 0.04 Archaeplastida
Pp3c20_15600V3.1 No alias secretion-associated RAS super family 2 0.02 Archaeplastida
Smo179259 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.06 Archaeplastida
Solyc01g060130.3.1 No alias GTPase (Sar1) 0.02 Archaeplastida
Solyc01g079535.1.1 No alias GTPase (Sar1) 0.09 Archaeplastida
Zm00001e017247_P001 No alias GTPase (Sar1) 0.04 Archaeplastida
Zm00001e017591_P001 No alias GTPase (Sar1) 0.02 Archaeplastida
Zm00001e026263_P001 No alias GTPase (Sar1) 0.05 Archaeplastida
AMTR_s00003p00037810 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 LandPlants
AT1G56330 SAR1, ATSAR1B,... secretion-associated RAS 1B 0.05 LandPlants
MA_10429869g0010 No alias GTPase (Sar1) 0.02 LandPlants
MA_14388g0010 No alias GTPase (Sar1) 0.03 LandPlants
Mp2g15910.1 No alias GTPase (Sar1) 0.04 LandPlants
Pp3c20_15600V3.1 No alias secretion-associated RAS super family 2 0.02 LandPlants
Smo179259 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.04 LandPlants
Solyc01g060130.3.1 No alias GTPase (Sar1) 0.02 LandPlants
Solyc01g079535.1.1 No alias GTPase (Sar1) 0.07 LandPlants
Zm00001e017591_P001 No alias GTPase (Sar1) 0.02 LandPlants
Zm00001e026263_P001 No alias GTPase (Sar1) 0.05 LandPlants
AMTR_s00003p00037810 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 SeedPlants
AT1G56330 SAR1, ATSAR1B,... secretion-associated RAS 1B 0.04 SeedPlants
MA_10429869g0010 No alias GTPase (Sar1) 0.02 SeedPlants
MA_14388g0010 No alias GTPase (Sar1) 0.03 SeedPlants
Solyc01g079535.1.1 No alias GTPase (Sar1) 0.07 SeedPlants
Solyc06g009660.3.1 No alias GTPase (Sar1) 0.02 SeedPlants
Zm00001e017591_P001 No alias GTPase (Sar1) 0.02 SeedPlants
Zm00001e026263_P001 No alias GTPase (Sar1) 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 8 192
No external refs found!