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  5. MA_354707g0010

MA_354707g0010


Description : AAA-ATPase At5g57480 OS=Arabidopsis thaliana (sp|q9fkm3|aatpk_arath : 212.0)


Gene families : OG0000163 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000163_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_354707g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00244450 evm_27.TU.AmTr_v1... AAA-ATPase At3g28510 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00024p00191310 evm_27.TU.AmTr_v1... AAA-ATPase At4g30250 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT2G18193 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT3G28520 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from all 47 species
AT3G28540 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 OrthoFinder output from all 47 species
Adi_g088333 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05390 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08283 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06267 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g42032 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g43660 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12070 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38981 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12634.t1 Aspi01Gene12634 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12635.t1 Aspi01Gene12635 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30040.t1 Aspi01Gene30040 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Azfi_s0008.g011534 No alias not classified & original description: CDS=1-1398 0.03 OrthoFinder output from all 47 species
Azfi_s0059.g034525 No alias not classified & original description: CDS=1-2166 0.02 OrthoFinder output from all 47 species
Azfi_s0349.g066535 No alias not classified & original description: CDS=1-1455 0.02 OrthoFinder output from all 47 species
Cba_g04601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g46255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46696 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g03684 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_11779 No alias AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os01g40140.1 LOC_Os01g40140 AAA-ATPase At3g50940 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os06g48250.1 LOC_Os06g48250 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os09g27340.1 LOC_Os09g27340 AAA-ATPase At5g57480 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os12g28550.1 LOC_Os12g28550 AAA-ATPase At5g40000 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os12g28590.1 AATP1, LOC_Os12g28590 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_344969g0010 No alias AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_5260g0010 AATP1 AAA-ATPase At3g28510 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_86564g0010 No alias AAA-ATPase At4g30250 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g03762 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g33481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04536 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g28405 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63892 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0163.g024038 No alias not classified & original description: CDS=1-1761 0.04 OrthoFinder output from all 47 species
Smo407065 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g096230.4.1 Solyc01g096230 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e003358_P001 AATP1, Zm00001e003358 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e008810_P001 AATP1, Zm00001e008810 AAA-ATPase ASD, mitochondrial OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e012527_P001 Zm00001e012527 AAA-ATPase At2g46620 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e033043_P001 Zm00001e033043 AAA-ATPase At3g28580 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e034224_P001 Zm00001e034224 AAA-ATPase At4g25835 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 12 111
No external refs found!