MA_34514g0010 (VPS53, HIT1, ATVPS53)

Aliases : VPS53, HIT1, ATVPS53

Description : component VPS53/HIT1 of GARP/EARP (Golgi-/Endosome-Associated-Retrograde-Protein) complexes

Gene families : OG0003936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003936_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_34514g0010

Target	Alias	Description	ECC score	Gene Family Method
Azfi_s0010.g012081	VPS53, HIT1, ATVPS53	component *(VPS53/HIT1) of GARP/EARP...	0.03	OrthoFinder output from all 47 species
Ceric.34G024900.1	VPS53, HIT1,...	component *(VPS53/HIT1) of GARP/EARP...	0.02	OrthoFinder output from all 47 species
Dcu_g22740	VPS53, HIT1, ATVPS53	component *(VPS53/HIT1) of GARP/EARP...	0.03	OrthoFinder output from all 47 species
GSVIVT01016094001	VPS53, HIT1, ATVPS53	Vesicle trafficking.target membrane tethering.GARP/EARP...	0.03	OrthoFinder output from all 47 species
Gb_31031	VPS53, HIT1, ATVPS53	component VPS53/HIT1 of GARP/EARP...	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0009.g004488	VPS53, HIT1, ATVPS53	component *(VPS53/HIT1) of GARP/EARP...	0.03	OrthoFinder output from all 47 species
Solyc04g049490.3.1	VPS53, HIT1,...	component VPS53/HIT1 of GARP/EARP...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	HCCA
BP	GO:0006887	exocytosis	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
CC	GO:0099023	vesicle tethering complex	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR007234	Vps53_N	64	193

External Links

No external refs found!