1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_3352g0010

MA_3352g0010


Description : component LUX of circadian clock Evening complex (EC)


Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_3352g0010
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
Cba_g06405 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species
Ceric.21G058200.1 RR12, ARR12,... subgroup ARR-B transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g15966 ARR11 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g08859 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.03 OrthoFinder output from all 47 species
Ehy_g00840 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011650001 ARR1, RR1 RNA biosynthesis.transcriptional activation.ARR-B... 0.03 OrthoFinder output from all 47 species
Msp_g14365 ARR11 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15649 ARR11 subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g34775 LUX, PCL1 MYB-RELATED transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g01350 ARR1, RR1 subgroup ARR-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39384 No alias subgroup ARR-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g29793 LUX, PCL1 component *(LUX) of circadian clock Evening complex (EC)... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 103 151
No external refs found!