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Aliases : SMG7
Description : Protein SMG7 OS=Arabidopsis thaliana (sp|a9qm73|smg7_arath : 142.0)
Gene families : OG0001313 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001313_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00046p00170580 | SMG7,... | RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g055840 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Adi_g067504 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g05541 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Ala_g02690 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Als_g15194 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g23897 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.05 | OrthoFinder output from all 47 species | |
| Aop_g62611 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g015951 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0113.g045981 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g39122 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.27G021400.1 | SMG7, Ceric.27G021400 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Dac_g16006 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g02039 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g23233 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g05096 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01033622001 | SMG7 | RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01037278001 | SMG7 | RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_21699 | SMG7 | SMG7 Nonsense-Mediated mRNA Decay protein | 0.02 | OrthoFinder output from all 47 species | |
| Len_g28232 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Mp8g12080.1 | SMG7 | SMG7 Nonsense-Mediated mRNA Decay protein | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g13643 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
| Ore_g34667 | SMG7 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g36629 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g43522 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.07 | OrthoFinder output from all 47 species | |
| Pir_g07446 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.06 | OrthoFinder output from all 47 species | |
| Pnu_g07512 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g11325 | SMG7 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0205.g025727 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g16577 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g22969 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g25590 | No alias | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Smo410159 | SMG7 | RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g080740.2.1 | SMG7, Solyc10g080740 | SMG7 Nonsense-Mediated mRNA Decay protein | 0.05 | OrthoFinder output from all 47 species | |
| Solyc12g019960.2.1 | SMG7, Solyc12g019960 | SMG7 Nonsense-Mediated mRNA Decay protein | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g17881 | SMG7 | Nonsense-Mediated mRNA Decay protein *(SMG7) & original... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e009613_P002 | SMG7, Zm00001e009613 | SMG7 Nonsense-Mediated mRNA Decay protein | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004197 | cysteine-type endopeptidase activity | IEP | HCCA |
| MF | GO:0004198 | calcium-dependent cysteine-type endopeptidase activity | IEP | HCCA |
| BP | GO:0006281 | DNA repair | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0006914 | autophagy | IEP | HCCA |
| BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | HCCA |
| BP | GO:0033554 | cellular response to stress | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| MF | GO:0046873 | metal ion transmembrane transporter activity | IEP | HCCA |
| BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
| BP | GO:0061919 | process utilizing autophagic mechanism | IEP | HCCA |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR018834 | DNA/RNA-bd_Est1-type | 21 | 172 |
| No external refs found! |