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  5. MA_324587g0010

MA_324587g0010


Description : C3H zinc finger transcription factor


Gene families : OG0000614 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000614_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_324587g0010

Target Alias Description ECC score Gene Family Method Actions
AT1G32360 No alias Zinc finger (CCCH-type) family protein 0.04 OrthoFinder output from all 47 species
Aop_g14447 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene13462.t1 Aspi01Gene13462 regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Dcu_g04722 No alias regulatory protein of RNA homeostasis & original... 0.03 OrthoFinder output from all 47 species
Ehy_g10013 ZFWD1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13206 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Len_g04738 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g16999 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Msp_g09379 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g02248 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08578 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g005344 No alias regulatory protein of RNA homeostasis & original... 0.02 OrthoFinder output from all 47 species
Smo413367 No alias Zinc finger CCCH domain-containing protein 56 OS=Oryza... 0.03 OrthoFinder output from all 47 species
Tin_g09350 No alias regulatory protein of RNA homeostasis & original... 0.04 OrthoFinder output from all 47 species
Tin_g19547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR041367 Znf-CCCH_4 251 273
IPR000571 Znf_CCCH 315 340
No external refs found!