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  5. MA_3236g0010

MA_3236g0010 (SLY2)


Aliases : SLY2

Description : SLY-type gibberellin signal transducer. component F-box of SCF E3 ubiquitin ligase complex. component FBX of SCF E3 ubiquitin ligase complex


Gene families : OG0001049 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_3236g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00031290 evm_27.TU.AmTr_v1... F-box protein At2g27310 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT2G27310 No alias F-box family protein 0.02 OrthoFinder output from all 47 species
Aev_g04411 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Aev_g16096 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Als_g60927 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g04265 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Aob_g07109 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Aop_g01209 SLY2 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene24799.t1 Aspi01Gene24799 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.04 OrthoFinder output from all 47 species
Cba_g22907 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Gb_08961 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.04 OrthoFinder output from all 47 species
Gb_29906 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.04 OrthoFinder output from all 47 species
LOC_Os04g33820.1 LOC_Os04g33820 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g06030.1 LOC_Os12g06030 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_164016g0010 SLY1 SLY-type gibberellin signal transducer. component F-box... 0.02 OrthoFinder output from all 47 species
MA_9868304g0010 SLY1 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g18489 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Ore_g26122 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Ore_g32241 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Pir_g11658 No alias substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Pnu_g17370 SLY1 substrate adaptor of SCF E3 ubiquitin ligase *(SLY) &... 0.02 OrthoFinder output from all 47 species
Smo80605 No alias Probable F-box protein At2g36090 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Tin_g03889 No alias substrate adaptor of SCF E3 ubiquiTin ligase *(SLY) &... 0.03 OrthoFinder output from all 47 species
Zm00001e009127_P001 Zm00001e009127 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e014737_P001 Zm00001e014737 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e040837_P001 Zm00001e040837 Probable F-box protein At2g36090 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 7 46
No external refs found!