Aliases : CRR22
Description : Pentatricopeptide repeat-containing protein DOT4, chloroplastic OS=Arabidopsis thaliana (sp|q9sn39|pp320_arath : 699.0)
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00008p00153950 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00016p00259690 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At5g46460,... | 0.03 | OrthoFinder output from all 47 species | |
AMTR_s00029p00204910 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At4g19191,... | 0.04 | OrthoFinder output from all 47 species | |
AMTR_s00061p00127300 | MEF22,... | Pentatricopeptide repeat-containing protein At3g12770... | 0.02 | OrthoFinder output from all 47 species | |
AT1G18485 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G13650 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G18750 | DOT4 | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT5G66520 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
GSVIVT01009407001 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01011333001 | SLO1 | Pentatricopeptide repeat-containing protein At1g08070,... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01017365001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01023971001 | No alias | Pentatricopeptide repeat-containing protein At4g35130,... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01036207001 | OTP82 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
Gb_00204 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_00862 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Gb_02037 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_02373 | CRR22 | Pentatricopeptide repeat-containing protein At3g09040,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_03345 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_03473 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_03571 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_03626 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_03997 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_04167 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
Gb_04420 | OTP86 | Pentatricopeptide repeat-containing protein At3g03580... | 0.07 | OrthoFinder output from all 47 species | |
Gb_04533 | CRR22 | RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
Gb_04894 | CRR22 | Pentatricopeptide repeat-containing protein At3g03580... | 0.05 | OrthoFinder output from all 47 species | |
Gb_04990 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_05116 | CRR22 | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
Gb_05162 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
Gb_05647 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
Gb_05942 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Gb_06193 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
Gb_06361 | REME1 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_07617 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.05 | OrthoFinder output from all 47 species | |
Gb_07723 | OTP84 | RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
Gb_07754 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.07 | OrthoFinder output from all 47 species | |
Gb_09406 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.06 | OrthoFinder output from all 47 species | |
Gb_09410 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_09741 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Gb_10152 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
Gb_10157 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
Gb_11036 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.06 | OrthoFinder output from all 47 species | |
Gb_11221 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Gb_14133 | OTP84 | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
Gb_14323 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein DOT4,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_14324 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_16032 | EMB2261 | Pentatricopeptide repeat-containing protein At3g49170,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_16448 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.03 | OrthoFinder output from all 47 species | |
Gb_16546 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
Gb_16895 | CRR2 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_17379 | No alias | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
Gb_18412 | OTP84 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_19299 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.06 | OrthoFinder output from all 47 species | |
Gb_20187 | DOT4 | Pentatricopeptide repeat-containing protein At5g16860... | 0.03 | OrthoFinder output from all 47 species | |
Gb_20749 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | OrthoFinder output from all 47 species | |
Gb_21054 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.07 | OrthoFinder output from all 47 species | |
Gb_22656 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.04 | OrthoFinder output from all 47 species | |
Gb_23083 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_23085 | No alias | RNA editing factor (MEF19) | 0.04 | OrthoFinder output from all 47 species | |
Gb_23088 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_23678 | CRR2 | Pentatricopeptide repeat-containing protein At3g46790,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_23798 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_23934 | OTP84 | Pentatricopeptide repeat-containing protein At3g12770... | 0.08 | OrthoFinder output from all 47 species | |
Gb_24126 | CRR22 | Pentatricopeptide repeat-containing protein At3g12770... | 0.04 | OrthoFinder output from all 47 species | |
Gb_24515 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
Gb_24928 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
Gb_25582 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.04 | OrthoFinder output from all 47 species | |
Gb_26049 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.04 | OrthoFinder output from all 47 species | |
Gb_26158 | CRR22 | RNA editing factor (OTP82) | 0.07 | OrthoFinder output from all 47 species | |
Gb_26526 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.06 | OrthoFinder output from all 47 species | |
Gb_27176 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
Gb_27454 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
Gb_27880 | DOT4 | RNA editing factor (ECB2/VAC1) | 0.03 | OrthoFinder output from all 47 species | |
Gb_28288 | CRR22 | Pentatricopeptide repeat-containing protein At2g27610... | 0.06 | OrthoFinder output from all 47 species | |
Gb_28393 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_28582 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_29880 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.05 | OrthoFinder output from all 47 species | |
Gb_30004 | No alias | Pentatricopeptide repeat-containing protein At3g03580... | 0.1 | OrthoFinder output from all 47 species | |
Gb_30190 | No alias | Pentatricopeptide repeat-containing protein At1g18485... | 0.07 | OrthoFinder output from all 47 species | |
Gb_31266 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_31702 | CRR22 | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
Gb_32077 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_32921 | OTP84 | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
Gb_33210 | OTP84 | RNA editing factor (OTP82) | 0.04 | OrthoFinder output from all 47 species | |
Gb_33374 | No alias | Pentatricopeptide repeat-containing protein At3g63370,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_34236 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.04 | OrthoFinder output from all 47 species | |
Gb_34816 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
Gb_35042 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_35396 | No alias | Pentatricopeptide repeat-containing protein At4g39530... | 0.07 | OrthoFinder output from all 47 species | |
Gb_36538 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_36676 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_36806 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.06 | OrthoFinder output from all 47 species | |
Gb_37102 | OTP84 | RNA editing factor (MEF19) | 0.05 | OrthoFinder output from all 47 species | |
Gb_37261 | CRR22 | Pentatricopeptide repeat-containing protein At4g02750... | 0.06 | OrthoFinder output from all 47 species | |
Gb_37509 | CRR22 | Pentatricopeptide repeat-containing protein At3g03580... | 0.04 | OrthoFinder output from all 47 species | |
Gb_37516 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
Gb_38129 | OTP84 | RNA editing factor (OTP82) | 0.03 | OrthoFinder output from all 47 species | |
Gb_38232 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
Gb_38248 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.05 | OrthoFinder output from all 47 species | |
Gb_38249 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.08 | OrthoFinder output from all 47 species | |
Gb_38417 | CRR2 | OTP70 plastidial RNA splicing factor | 0.03 | OrthoFinder output from all 47 species | |
Gb_38992 | EMB2758 | Pentatricopeptide repeat-containing protein At4g33990... | 0.03 | OrthoFinder output from all 47 species | |
Gb_39402 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
Gb_39406 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
Gb_40380 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
Gb_40436 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | OrthoFinder output from all 47 species | |
Gb_41454 | No alias | Pentatricopeptide repeat-containing protein At4g18520,... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g095690.2.1 | Solyc01g095690 | Pentatricopeptide repeat-containing protein At4g01030,... | 0.04 | OrthoFinder output from all 47 species | |
Solyc11g017370.3.1 | Solyc11g017370 | RNA editing factor (AEF1) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e011875_P001 | OTP85, Zm00001e011875 | RNA editing factor (OTP85) | 0.08 | OrthoFinder output from all 47 species | |
Zm00001e015727_P001 | Zm00001e015727 | Pentatricopeptide repeat-containing protein At5g66520... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e027846_P001 | CRR21, Zm00001e027846 | RNA editing factor (CRR21) | 0.08 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR032867 | DYW_dom | 748 | 872 |
IPR002885 | Pentatricopeptide_repeat | 229 | 285 |
IPR002885 | Pentatricopeptide_repeat | 170 | 217 |
IPR002885 | Pentatricopeptide_repeat | 575 | 622 |
IPR002885 | Pentatricopeptide_repeat | 373 | 420 |
IPR002885 | Pentatricopeptide_repeat | 473 | 521 |
IPR002885 | Pentatricopeptide_repeat | 81 | 101 |
IPR002885 | Pentatricopeptide_repeat | 718 | 744 |
No external refs found! |