MA_3175g0010


Description : no hits & (original description: none)


Gene families : OG0005850 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005850_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_3175g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00267150 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.04 OrthoFinder output from all 47 species
AT3G14120 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.05 OrthoFinder output from all 47 species
Adi_g058716 No alias scaffold nucleoporin of nuclear pore complex *(NUP107) &... 0.02 OrthoFinder output from all 47 species
Cre10.g425675 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g10818 No alias scaffold nucleoporin of nuclear pore complex *(NUP107) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01016717001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
GSVIVT01016718001 No alias Nuclear pore complex protein NUP107 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
LOC_Os11g42420.1 LOC_Os11g42420 NUP107 scaffold nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species
Ore_g16075 No alias scaffold nucleoporin of nuclear pore complex *(NUP107) &... 0.04 OrthoFinder output from all 47 species
Pnu_g00861 No alias scaffold nucleoporin of nuclear pore complex *(NUP107) &... 0.02 OrthoFinder output from all 47 species
Sam_g36573 No alias scaffold nucleoporin of nuclear pore complex *(NUP107) &... 0.02 OrthoFinder output from all 47 species
Solyc12g049410.3.1 Solyc12g049410 NUP107 scaffold nucleoporin of nuclear pore complex 0.03 OrthoFinder output from all 47 species
Spa_g10321 No alias scaffold nucleoporin of nuclear pore complex *(NUP107) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0017056 structural constituent of nuclear pore IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!