MA_3073g0010 (WIN1, SHN1)

Aliases : WIN1, SHN1

Description : transcription factor (ERF). SHN-type cutin and suberin biosynthesis transcription factor

Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: MA_3073g0010

Target	Alias	Description	ECC score	Gene Family Method
AT3G61630	CRF6	cytokinin response factor 6	0.04	OrthoFinder output from all 47 species
AT5G43410	No alias	Integrase-type DNA-binding superfamily protein	0.03	OrthoFinder output from all 47 species
Adi_g013119	ATERF12, ERF12	subgroup ERF-VIII transcription factor & original...	0.03	OrthoFinder output from all 47 species
Adi_g013120	ATERF11, ERF11	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Adi_g053440	ATERF4, RAP2.5,...	subgroup ERF-VIII transcription factor & original...	0.01	OrthoFinder output from all 47 species
Adi_g056328	No alias	subgroup ERF-I transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g074866	RAP2.11	transcription factor *(ERN1) & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g00845	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aev_g05911	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aev_g06485	ATERF3, ERF3	subgroup ERF-VIII transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aev_g21811	DEAR2	subgroup ERF-II transcription factor *(ERF19/20) &...	0.02	OrthoFinder output from all 47 species
Ala_g16411	TINY2	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Ala_g24618	No alias	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Aob_g18865	TINY2	subgroup ERF-III transcription factor & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene02794.t1	RAP2.11, Aspi01Gene02794	transcription factor *(ERN1) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene70898.t1	Aspi01Gene70898	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene72130.t1	TINY2, Aspi01Gene72130	subgroup ERF-III transcription factor & original...	0.03	OrthoFinder output from all 47 species
Cba_g60740	RAP2.11	transcription factor *(ERN1) & original description: none	0.04	OrthoFinder output from all 47 species
GSVIVT01013914001	ERF-6-6, ERF6, ATERF6	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
GSVIVT01013924001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.02	OrthoFinder output from all 47 species
GSVIVT01013929001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
Gb_06407	No alias	transcription factor (DREB)	0.08	OrthoFinder output from all 47 species
LOC_Os12g39330.1	RAP2.11, LOC_Os12g39330	transcription factor (ERF). transcription factor (ERN1)	0.03	OrthoFinder output from all 47 species
Len_g20338	HRE2	transcription factor component *(HRE/RAP2.12) of...	0.03	OrthoFinder output from all 47 species
MA_120531g0010	ATERF-9, ERF9, ATERF9	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
MA_14005g0010	No alias	Ethylene-responsive transcription factor ERF113...	0.1	OrthoFinder output from all 47 species
MA_67585g0010	No alias	transcription factor (DREB)	0.06	OrthoFinder output from all 47 species
MA_8552524g0010	ERF-1, ATERF-1	transcription factor (ERF)	0.11	OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011575	DEAR1, CEJ1, ATERF#011	not classified & original description: CDS=1-717	0.03	OrthoFinder output from all 47 species
Solyc06g068360.3.1	Solyc06g068360	transcription factor (ERF)	0.03	OrthoFinder output from all 47 species
Zm00001e022016_P001	Zm00001e022016	transcription factor (DREB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	6	55

External Links

No external refs found!

MA_3073g0010 (WIN1, SHN1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation