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  5. LOC_Os06g50400

LOC_Os06g50400 (Os06g0718100)


Aliases : Os06g0718100

Description : 10.7 cell wall.modification member of Alpha-Expansin Gene Family. Naming convention from the Expansin Working Group (Kende et al, 2004. Plant Mol Bio) expansin 11 (EXPA11)


Gene families : OG_01_0000017 (Gene family) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): LOC_Os06g50400
Cluster HCCA cluster: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008762001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
GSVIVT01014362001 No alias 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
GSVIVT01029411001 No alias 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
LOC_Os02g16850 Os02g0268600 10.7 cell wall.modification member of Alpha-Expansin... 0.03 Gene family
LOC_Os02g51040 Os02g0744200 10.7 cell wall.modification member of Alpha-Expansin... 0.02 Gene family
MA_3618g0010 No alias 10.7 cell wall.modification Member of Alpha-Expansin... 0.02 Gene family
Solyc02g088100.3.1 Solyc02g088100.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.02 Gene family
Solyc06g005560.3.1 Solyc06g005560.3 10.7 cell wall.modification putative expansin. Naming... 0.02 Gene family
Solyc06g076220.3.1 Solyc06g076220.3 10.7 cell wall.modification Encodes an expansin. Naming... 0.01 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 168 247
IPR009009 RlpA-like_DPBB 69 156
No external refs found!