Description : U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica (sp|q5vrh9|pub12_orysj : 270.0)
Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00030110 | PUB15,... | U-box domain-containing protein 15 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00007p00217990 | evm_27.TU.AmTr_v1... | U-box domain-containing protein 16 OS=Arabidopsis thaliana | 0.01 | OrthoFinder output from all 47 species | |
AMTR_s00025p00052670 | PUB13, ATPUB13,... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AT1G29340 | ATPUB17, PUB17 | plant U-box 17 | 0.02 | OrthoFinder output from all 47 species | |
AT5G42340 | PUB15 | Plant U-Box 15 | 0.01 | OrthoFinder output from all 47 species | |
AT5G58680 | No alias | ARM repeat superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
Adi_g017517 | ATPUB17, PUB17 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Adi_g019046 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Adi_g026489 | No alias | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Adi_g080188 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Adi_g102535 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ala_g06664 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Als_g03799 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g31832 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Aop_g00484 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aop_g19819 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene01377.t1 | PUB14, ATPUB14,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene44182.t1 | ATPUB17, PUB17,... | E3 ubiquitin ligase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Aspi01Gene72934.t1 | PUB13, ATPUB13,... | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0001.g000295 | No alias | not classified & original description: CDS=1-2304 | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0292.g063403 | No alias | not classified & original description: CDS=1-2253 | 0.05 | OrthoFinder output from all 47 species | |
Cba_g02580 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.10G010300.1 | ATPUB17, PUB17,... | not classified & original description: pacid=50611933... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g13651 | No alias | E3 ubiquitin ligase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Dde_g07191 | PUB18, ATPUB18 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ehy_g06975 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01026372001 | PUB9, ATPUB9 | Protein degradation.peptide tagging.Ubiquitin... | 0.05 | OrthoFinder output from all 47 species | |
Gb_10871 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
Gb_12875 | PUB13, ATPUB13 | E3 ubiquitin ligase (PUB) | 0.03 | OrthoFinder output from all 47 species | |
Gb_29276 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os01g60860.1 | LOC_Os01g60860 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os03g16824.1 | PUB13, ATPUB13,... | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os05g39930.1 | LOC_Os05g39930 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g51130.1 | PUB15, LOC_Os06g51130 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os08g37570.1 | PUB15, LOC_Os08g37570 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
Len_g00426 | ATPUB17, PUB17 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_9917294g0010 | ATPUB17, PUB17 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g16068 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Nbi_g38088 | ATPUB17, PUB17 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ore_g35149 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g09772 | No alias | E3 ubiquitin ligase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g30958 | PUB13, ATPUB13 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0001.g000382 | No alias | not classified & original description: CDS=1-1704 | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0007.g003607 | ATPUB17, PUB17 | not classified & original description: CDS=1-2595 | 0.01 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0073.g017096 | PUB8, B80 | E3 ubiquitin ligase *(PUB8) & original description: CDS=1-1548 | 0.01 | OrthoFinder output from all 47 species | |
Smo415326 | ATPUB17, PUB17 | U-box domain-containing protein 1 OS=Medicago truncatula | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g072080.1.1 | ATPUB17, PUB17,... | U-box domain-containing protein 17 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
Solyc03g114160.1.1 | Solyc03g114160 | E3 ubiquitin ligase (PUB) | 0.02 | OrthoFinder output from all 47 species | |
Spa_g05552 | ATPUB17, PUB17 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g12131 | PUB13, ATPUB13 | E3 ubiquitin ligase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Spa_g24085 | PUB14, ATPUB14 | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Spa_g25117 | PUB14, ATPUB14 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Tin_g06505 | PUB14, ATPUB14 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Tin_g14575 | PUB18, ATPUB18 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e003398_P001 | PUB15, Zm00001e003398 | U-box domain-containing protein 15 OS=Arabidopsis... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019429_P001 | Zm00001e019429 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e028839_P001 | Zm00001e028839 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e031915_P001 | Zm00001e031915 | U-box domain-containing protein 16 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004842 | ubiquitin-protein transferase activity | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
BP | GO:0016567 | protein ubiquitination | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
No external refs found! |