MA_29512g0010


Description : SSU processome assembly factor (UTP4/PCN)


Gene families : OG0005021 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005021_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_29512g0010
Cluster HCCA: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0237.g059573 No alias SSU processome assembly factor *(UTP4/PCN) & original... 0.04 OrthoFinder output from all 47 species
Ceric.23G087200.1 Ceric.23G087200 SSU processome assembly factor *(UTP4/PCN) & original... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000852.39 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Cre13.g606850 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 OrthoFinder output from all 47 species
Dcu_g05765 No alias SSU processome assembly factor *(UTP4/PCN) & original... 0.02 OrthoFinder output from all 47 species
Mp5g05000.1 No alias SSU processome assembly factor (UTP4/PCN) 0.03 OrthoFinder output from all 47 species
Ore_g36314 No alias SSU processome assembly factor *(UTP4/PCN) & original... 0.02 OrthoFinder output from all 47 species
Smo74975 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Solyc04g077680.3.1 Solyc04g077680 SSU processome assembly factor (UTP4/PCN) 0.03 OrthoFinder output from all 47 species
Zm00001e005587_P002 Zm00001e005587 SSU processome assembly factor (UTP4/PCN) 0.03 OrthoFinder output from all 47 species
Zm00001e012090_P001 Zm00001e012090 SSU processome assembly factor (UTP4/PCN) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005092 GDP-dissociation inhibitor activity IEP HCCA
BP GO:0007264 small GTPase mediated signal transduction IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!