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  5. MA_294189g0010

MA_294189g0010 (SS2, AtSS2)


Aliases : SS2, AtSS2

Description : starch synthase (SSII)


Gene families : OG0001429 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001429_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_294189g0010

Target Alias Description ECC score Gene Family Method Actions
Ceric.14G059800.1 SS2, AtSS2,... not classified & original description: pacid=50634171... 0.03 OrthoFinder output from all 47 species
Cre03.g185250 SS2, AtSS2 Carbohydrate metabolism.starch... 0.04 OrthoFinder output from all 47 species
Dac_g06819 SSI1, ATSS1, SSI EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
MA_11214g0010 SS2, AtSS2 Granule-bound starch synthase 2,... 0.04 OrthoFinder output from all 47 species
Solyc03g083090.4.1 SSI1, ATSS1,... starch synthase (SSI) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 141 272
IPR013534 Starch_synth_cat_dom 10 82
No external refs found!