LOC_Os01g18050.1


Description : component beta-Tubulin of alpha-beta-Tubulin heterodimer


Gene families : OG_01_0000156 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000156_tree ,
OG_02_0000074 (LandPlants) Phylogenetic Tree(s): OG_02_0000074_tree ,
OG_03_0000065 (SeedPlants) Phylogenetic Tree(s): OG_03_0000065_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g18050.1
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00251790 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
AMTR_s00009p00255970 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
AMTR_s00029p00190040 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
AMTR_s00036p00184840 evm_27.TU.AmTr_v1... Tubulin beta-4 chain OS=Eleusine indica 0.02 Archaeplastida
AMTR_s00101p00135960 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
AT1G20010 TUB5 tubulin beta-5 chain 0.05 Archaeplastida
AT2G29550 TUB7 tubulin beta-7 chain 0.05 Archaeplastida
AT5G12250 TUB6 beta-6 tubulin 0.02 Archaeplastida
AT5G23860 TUB8 tubulin beta 8 0.04 Archaeplastida
AT5G62690 TUB2 tubulin beta chain 2 0.08 Archaeplastida
AT5G62700 TUB3 tubulin beta chain 3 0.08 Archaeplastida
Cre12.g542250 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
Cre12.g549550 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
GSVIVT01019758001 No alias Tubulin beta-4 chain OS=Eleusine indica 0.03 Archaeplastida
GSVIVT01021707001 No alias Tubulin beta chain (Fragment) OS=Glycine max 0.04 Archaeplastida
GSVIVT01025778001 No alias Tubulin beta-4 chain OS=Eleusine indica 0.03 Archaeplastida
Gb_15590 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Gb_25332 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
MA_230579g0010 No alias Tubulin beta-8 chain OS=Zea mays (sp|q41785|tbb8_maize : 281.0) 0.03 Archaeplastida
MA_230579g0020 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
MA_44957g0020 No alias Tubulin beta-3 chain OS=Triticum aestivum... 0.03 Archaeplastida
MA_55439g0010 No alias Tubulin beta-1 chain OS=Solanum tuberosum... 0.02 Archaeplastida
MA_623245g0010 No alias No annotation 0.02 Archaeplastida
MA_648399g0010 No alias Tubulin beta chain OS=Hordeum vulgare... 0.02 Archaeplastida
MA_72744g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
MA_7436374g0010 No alias Tubulin beta-6 chain OS=Zea mays (sp|q41783|tbb6_maize : 276.0) 0.03 Archaeplastida
MA_87491g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
MA_9578301g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Mp1g20730.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Mp2g16780.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Pp3c21_17300V3.1 No alias tubulin beta chain 2 0.03 Archaeplastida
Pp3c5_20690V3.1 No alias tubulin beta 8 0.02 Archaeplastida
Pp3c6_7500V3.1 No alias tubulin beta 8 0.02 Archaeplastida
Smo164404 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 Archaeplastida
Smo170592 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.04 Archaeplastida
Smo186992 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
Smo23468 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Smo402668 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 Archaeplastida
Smo408201 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 Archaeplastida
Solyc04g081490.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Solyc06g076640.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Solyc10g080940.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Solyc10g086760.2.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 Archaeplastida
Zm00001e000048_P003 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
Zm00001e005208_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 Archaeplastida
Zm00001e012336_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 Archaeplastida
Zm00001e019525_P002 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.01 Archaeplastida
Zm00001e025464_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.08 Archaeplastida
Zm00001e028896_P004 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 Archaeplastida
Zm00001e030351_P001 No alias no hits & (original description: none) 0.09 Archaeplastida
Zm00001e037773_P002 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 Archaeplastida
AMTR_s00009p00251790 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 LandPlants
AMTR_s00009p00255970 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 LandPlants
AMTR_s00010p00119100 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 LandPlants
AMTR_s00029p00190040 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 LandPlants
AMTR_s00101p00135960 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 LandPlants
AT1G20010 TUB5 tubulin beta-5 chain 0.04 LandPlants
AT1G75780 TUB1 tubulin beta-1 chain 0.02 LandPlants
AT2G29550 TUB7 tubulin beta-7 chain 0.04 LandPlants
AT5G12250 TUB6 beta-6 tubulin 0.03 LandPlants
AT5G23860 TUB8 tubulin beta 8 0.04 LandPlants
AT5G44340 TUB4 tubulin beta chain 4 0.01 LandPlants
AT5G62690 TUB2 tubulin beta chain 2 0.08 LandPlants
AT5G62700 TUB3 tubulin beta chain 3 0.08 LandPlants
GSVIVT01019758001 No alias Tubulin beta-4 chain OS=Eleusine indica 0.02 LandPlants
GSVIVT01025778001 No alias Tubulin beta-4 chain OS=Eleusine indica 0.03 LandPlants
Gb_15590 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 LandPlants
Gb_22609 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 LandPlants
Gb_25332 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 LandPlants
Gb_28116 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 LandPlants
LOC_Os05g34170.2 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 LandPlants
MA_230579g0010 No alias Tubulin beta-8 chain OS=Zea mays (sp|q41785|tbb8_maize : 281.0) 0.02 LandPlants
MA_230579g0020 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 LandPlants
MA_55439g0010 No alias Tubulin beta-1 chain OS=Solanum tuberosum... 0.02 LandPlants
MA_623245g0010 No alias No annotation 0.02 LandPlants
MA_648399g0010 No alias Tubulin beta chain OS=Hordeum vulgare... 0.02 LandPlants
MA_72744g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 LandPlants
MA_7436374g0010 No alias Tubulin beta-6 chain OS=Zea mays (sp|q41783|tbb6_maize : 276.0) 0.02 LandPlants
MA_79708g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 LandPlants
MA_87491g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.01 LandPlants
MA_9578301g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 LandPlants
Mp1g20730.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 LandPlants
Mp2g16780.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 LandPlants
Pp3c21_17300V3.1 No alias tubulin beta chain 2 0.02 LandPlants
Pp3c5_20340V3.1 No alias tubulin beta chain 2 0.01 LandPlants
Pp3c6_7500V3.1 No alias tubulin beta 8 0.02 LandPlants
Smo164404 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.05 LandPlants
Smo170592 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 LandPlants
Smo186992 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 LandPlants
Smo23429 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.01 LandPlants
Smo23468 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.03 LandPlants
Smo408201 No alias Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 LandPlants
Solyc06g076640.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 LandPlants
Solyc10g080940.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 LandPlants
Solyc10g086760.2.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 LandPlants
Zm00001e000048_P003 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.04 LandPlants
Zm00001e012336_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 LandPlants
Zm00001e019525_P002 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.01 LandPlants
Zm00001e025464_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.08 LandPlants
Zm00001e028896_P004 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 LandPlants
Zm00001e030351_P001 No alias no hits & (original description: none) 0.08 LandPlants
Zm00001e037773_P002 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 LandPlants
AMTR_s00009p00255970 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 SeedPlants
AMTR_s00029p00190040 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.alpha-beta-Tubulin... 0.02 SeedPlants
AT1G20010 TUB5 tubulin beta-5 chain 0.04 SeedPlants
AT1G75780 TUB1 tubulin beta-1 chain 0.01 SeedPlants
AT2G29550 TUB7 tubulin beta-7 chain 0.04 SeedPlants
AT5G12250 TUB6 beta-6 tubulin 0.03 SeedPlants
AT5G23860 TUB8 tubulin beta 8 0.04 SeedPlants
AT5G44340 TUB4 tubulin beta chain 4 0.01 SeedPlants
AT5G62690 TUB2 tubulin beta chain 2 0.08 SeedPlants
AT5G62700 TUB3 tubulin beta chain 3 0.08 SeedPlants
GSVIVT01019758001 No alias Tubulin beta-4 chain OS=Eleusine indica 0.02 SeedPlants
GSVIVT01025778001 No alias Tubulin beta-4 chain OS=Eleusine indica 0.02 SeedPlants
Gb_15590 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 SeedPlants
Gb_25332 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 SeedPlants
Gb_28116 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 SeedPlants
MA_230579g0020 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 SeedPlants
MA_623245g0010 No alias No annotation 0.02 SeedPlants
MA_648399g0010 No alias Tubulin beta chain OS=Hordeum vulgare... 0.01 SeedPlants
MA_72744g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 SeedPlants
MA_87491g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.01 SeedPlants
MA_9578301g0010 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 SeedPlants
Solyc06g076640.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 SeedPlants
Solyc10g080940.3.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 SeedPlants
Solyc10g086760.2.1 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.05 SeedPlants
Zm00001e000048_P003 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.03 SeedPlants
Zm00001e019525_P002 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.01 SeedPlants
Zm00001e025464_P001 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.07 SeedPlants
Zm00001e028896_P004 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.02 SeedPlants
Zm00001e030351_P001 No alias no hits & (original description: none) 0.06 SeedPlants
Zm00001e037773_P002 No alias component beta-Tubulin of alpha-beta-Tubulin heterodimer 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR018316 Tubulin/FtsZ_2-layer-sand-dom 261 382
IPR003008 Tubulin_FtsZ_GTPase 3 211
No external refs found!