1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_28858g0010

MA_28858g0010


Description : Protein JINGUBANG OS=Arabidopsis thaliana (sp|o48716|jgb_arath : 176.0)


Gene families : OG0000309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000309_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_28858g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00162370 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00109p00135240 evm_27.TU.AmTr_v1... Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g00763 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g00841 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g22068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22044 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05746.t1 Aspi01Gene05746 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene30209.t1 Aspi01Gene30209 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44877.t1 Aspi01Gene44877 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72933.t1 Aspi01Gene72933 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14895 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007589001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01035639001 No alias Protein JINGUBANG OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_03640 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_04251 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_33493 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_33494 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Gb_33498 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.09 OrthoFinder output from all 47 species
LOC_Os01g13140.1 LOC_Os01g13140 Protein JINGUBANG OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Len_g36861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43220 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10431396g0020 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_107471g0010 No alias Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Msp_g10019 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32500 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g42519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g45800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23590 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08501 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g60508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g109120.3.1 Solyc01g109120 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc03g113850.1.1 Solyc03g113850 Protein JINGUBANG OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc12g044320.2.1 Solyc12g044320 Protein JINGUBANG OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g44621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007790_P001 Zm00001e007790 Protein JINGUBANG OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 309 349
IPR001680 WD40_repeat 261 299
No external refs found!