1. Home
  2. Species
  3. Picea abies
  4. Sequence
  5. MA_285386g0010

MA_285386g0010


Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 469.0)


Gene families : OG0020081 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0020081_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_285386g0010
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT5G42450 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
LOC_Os01g62220.1 LOC_Os01g62220 Pentatricopeptide repeat-containing protein At5g42450,... 0.04 OrthoFinder output from all 47 species
Solyc09g005710.3.1 Solyc09g005710 Pentatricopeptide repeat-containing protein At5g42450,... 0.04 OrthoFinder output from all 47 species
Zm00001e019345_P001 Zm00001e019345 Pentatricopeptide repeat-containing protein At5g42450,... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 346 393
IPR002885 Pentatricopeptide_repeat 114 162
IPR002885 Pentatricopeptide_repeat 246 292
IPR032867 DYW_dom 543 599
IPR002885 Pentatricopeptide_repeat 510 539
IPR002885 Pentatricopeptide_repeat 189 215
IPR002885 Pentatricopeptide_repeat 422 445
No external refs found!