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  5. LOC_Os01g16810.1

LOC_Os01g16810.1


Description : transcription factor (MYB)


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000116 (LandPlants) Phylogenetic Tree(s): OG_02_0000116_tree ,
OG_03_0000572 (SeedPlants) Phylogenetic Tree(s): OG_03_0000572_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g16810.1
Cluster HCCA: Cluster_163

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00003p00271440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00006p00267240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00010p00264600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00024p00224470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00036p00107460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00038p00183620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00049p00074250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00076p00157170 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00079p00143780 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00139p00079430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00186p00015620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AMTR_s01267p00006490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G14350 AtMYB124, MYB124, FLP Duplicated homeodomain-like superfamily protein 0.06 Archaeplastida
AT1G16490 MYB58, ATMYB58 myb domain protein 58 0.05 Archaeplastida
AT1G22640 MYB3, ATMYB3 myb domain protein 3 0.03 Archaeplastida
AT1G25340 MYB116, AtMYB116 myb domain protein 116 0.04 Archaeplastida
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.05 Archaeplastida
AT1G48000 AtMYB112, MYB112 myb domain protein 112 0.03 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.03 Archaeplastida
AT1G68320 BW62B, BW62C,... myb domain protein 62 0.04 Archaeplastida
AT1G79180 ATMYB63, MYB63 myb domain protein 63 0.03 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.04 Archaeplastida
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.03 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.04 Archaeplastida
AT3G02940 AtMYB107, MYB107 myb domain protein 107 0.03 Archaeplastida
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.03 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.03 Archaeplastida
AT3G23250 ATMYB15, ATY19, MYB15 myb domain protein 15 0.03 Archaeplastida
AT3G24310 MYB305, ATMYB71 myb domain protein 305 0.05 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.02 Archaeplastida
AT3G27920 ATMYB0, ATGL1, GL1, MYB0 myb domain protein 0 0.03 Archaeplastida
AT3G28910 MYB30, ATMYB30 myb domain protein 30 0.02 Archaeplastida
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.03 Archaeplastida
AT3G48920 MYB45, AtMYB45 myb domain protein 45 0.04 Archaeplastida
AT3G49690 MYB84, RAX3, ATMYB84 myb domain protein 84 0.03 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.03 Archaeplastida
AT3G55730 AtMYB109, MYB109 myb domain protein 109 0.02 Archaeplastida
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.04 Archaeplastida
AT4G01680 MYB55, AtMYB55 myb domain protein 55 0.04 Archaeplastida
AT4G05100 AtMYB74, MYB74 myb domain protein 74 0.03 Archaeplastida
AT4G21440 ATMYB102, ATM4, MYB102 MYB-like 102 0.03 Archaeplastida
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.04 Archaeplastida
AT5G16600 MYB43, AtMYB43 myb domain protein 43 0.03 Archaeplastida
AT5G26660 MYB86, ATMYB86 myb domain protein 86 0.03 Archaeplastida
AT5G40330 ATMYBRTF, ATMYB23, MYB23 myb domain protein 23 0.03 Archaeplastida
AT5G40350 MYB24, AtMYB24 myb domain protein 24 0.02 Archaeplastida
AT5G49330 PFG3, ATMYB111, MYB111 myb domain protein 111 0.04 Archaeplastida
AT5G56110 MYB103,... myb domain protein 103 0.03 Archaeplastida
AT5G62470 MYBCOV1, MYB96, ATMYB96 myb domain protein 96 0.03 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01004851001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01007731001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01008090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01008303001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01009280001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01009566001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01010086001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01011447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01013126001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01014770001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015575001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01017716001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01019410001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01025034001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01027811001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01028171001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01028981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035177001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035459001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01035463001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036712001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036802001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_02422 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_03227 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_06298 No alias transcription factor (MYB) 0.07 Archaeplastida
Gb_09907 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_18153 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_22239 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_24073 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_29789 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_29933 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_32143 No alias transcription factor (MYB) 0.05 Archaeplastida
Gb_34882 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_35820 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os01g51260.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g52410.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g74590.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os02g42870.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os03g04900.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os03g38210.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os04g08590.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g38740.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os04g42950.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g04210.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g46610.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g48010.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os07g31470.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g24800.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os10g33810.1 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_10426901g0020 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10435612g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_117992g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_1261g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_128244g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_128871g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_129382g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_136123g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_139448g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_139924g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_15502g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_15687g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_158319g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.06 Archaeplastida
MA_190973g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_22140g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_246142g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_278282g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_45091g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_492415g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_52293g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_6277697g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_6285g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_6393g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_79447g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8206949g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_9818613g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Pp3c15_1270V3.1 No alias myb domain protein 86 0.02 Archaeplastida
Pp3c17_7730V3.1 No alias myb domain protein 55 0.03 Archaeplastida
Pp3c1_1650V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c1_21610V3.1 No alias myb domain protein 103 0.02 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.04 Archaeplastida
Pp3c2_34670V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c4_13790V3.1 No alias myb domain protein 105 0.02 Archaeplastida
Pp3c6_9970V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Pp3c7_23450V3.1 No alias myb domain protein 106 0.05 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Solyc01g009070.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc01g010910.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc01g057910.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g067760.4.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g091980.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g093740.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc03g005570.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g025870.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g113530.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc03g116100.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc03g121740.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g005710.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g077260.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g007690.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g007870.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc06g009710.4.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc07g006750.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc09g008250.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc10g005760.3.1 No alias transcription factor (MYB). transcriptional key... 0.03 Archaeplastida
Solyc10g044680.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc11g069030.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc11g073120.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g099140.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e001341_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001803_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004140_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007422_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e007904_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e009453_P002 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e009831_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e009849_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e010995_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e011944_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015235_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e015239_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e016072_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e017365_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e017428_P003 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e017496_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e018415_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e019110_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020044_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e020754_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e020993_P002 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e023100_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e023733_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e026426_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e027003_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e028085_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e028135_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e029816_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e030314_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030480_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e031799_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e034118_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e037510_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e037956_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e038287_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e040334_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e041055_P001 No alias transcription factor (MYB). transcriptional key... 0.04 Archaeplastida
AMTR_s00006p00225600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
AMTR_s00010p00264600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
AMTR_s00186p00015620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.05 LandPlants
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.02 LandPlants
GSVIVT01008484001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
Gb_06298 No alias transcription factor (MYB) 0.05 LandPlants
Smo100734 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 LandPlants
Solyc05g007870.3.1 No alias transcription factor (MYB) 0.03 LandPlants
Zm00001e004128_P003 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e017365_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e033519_P001 No alias transcription factor (MYB) 0.02 LandPlants
Zm00001e037510_P001 No alias transcription factor (MYB) 0.02 LandPlants
AMTR_s00010p00264600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
AMTR_s00186p00015620 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 SeedPlants
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.05 SeedPlants
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.02 SeedPlants
Gb_06298 No alias transcription factor (MYB) 0.03 SeedPlants
Zm00001e017365_P001 No alias transcription factor (MYB) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 49 94
IPR001005 SANT/Myb 101 145
No external refs found!