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MA_27152g0010


Description : Protein RAE1 OS=Arabidopsis thaliana (sp|q38942|rae1_arath : 208.0)


Gene families : OG0004854 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004854_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_27152g0010
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00233620 evm_27.TU.AmTr_v1... Protein translocation.nucleus.nucleocytoplasmic... 0.03 OrthoFinder output from all 47 species
Azfi_s0174.g055933 No alias scaffold nucleoporin of nuclear pore complex *(RAE1) &... 0.04 OrthoFinder output from all 47 species
Ceric.33G060300.1 Ceric.33G060300 scaffold nucleoporin of nuclear pore complex *(RAE1) &... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000215.115 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 OrthoFinder output from all 47 species
Mp5g18210.1 No alias RAE1 scaffold nucleoporin of nuclear pore complex 0.04 OrthoFinder output from all 47 species
Pir_g02489 No alias scaffold nucleoporin of nuclear pore complex *(RAE1) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 29 55
IPR001680 WD40_repeat 113 139
No external refs found!