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  5. MA_268175g0010

MA_268175g0010 (PAM68)


Aliases : PAM68

Description : PAM68 protein involved in PS-II assembly


Gene families : OG0005725 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005725_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: MA_268175g0010

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00088520 evm_27.TU.AmTr_v1... Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
AT4G19100 PAM68 Protein of unknown function (DUF3464) 0.04 OrthoFinder output from all 47 species
Adi_g112211 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.03 OrthoFinder output from all 47 species
Adi_g112212 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.05 OrthoFinder output from all 47 species
Aev_g21605 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.02 OrthoFinder output from all 47 species
Ala_g26970 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.03 OrthoFinder output from all 47 species
Als_g24035 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.02 OrthoFinder output from all 47 species
Aob_g16015 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.03 OrthoFinder output from all 47 species
Aop_g00982 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene55602.t1 PAM68, Aspi01Gene55602 protein involved in PS-II assembly *(PAM68) & original... 0.06 OrthoFinder output from all 47 species
Cpa|evm.model.tig00021759.13 PAM68 Photosynthesis.photophosphorylation.photosystem... 0.02 OrthoFinder output from all 47 species
Dcu_g28925 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.04 OrthoFinder output from all 47 species
GSVIVT01018633001 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
GSVIVT01028843001 No alias Photosynthesis.photophosphorylation.photosystem... 0.03 OrthoFinder output from all 47 species
Ore_g07606 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.04 OrthoFinder output from all 47 species
Ore_g07607 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.03 OrthoFinder output from all 47 species
Pir_g19463 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.05 OrthoFinder output from all 47 species
Ppi_g00344 PAM68 protein involved in PS-II assembly *(PAM68) & original... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004418 hydroxymethylbilane synthase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR021855 PAM68-like 84 211
No external refs found!