Aliases : ATL2, TL2
Description : RING-H2-class E3 ligase
Gene families : OG0000008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: MA_2679g0010 | |
Cluster | HCCA: Cluster_85 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00203540 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00102p00069840 | evm_27.TU.AmTr_v1... | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
AT1G72220 | No alias | RING/U-box superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
AT2G34000 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT2G42360 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT4G09100 | No alias | RING/U-box superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
AT4G15975 | No alias | RING/U-box superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
AT4G24015 | No alias | RING/U-box superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
AT5G42200 | No alias | RING/U-box superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
Adi_g012488 | RHA3A | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g049763 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g057600 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Adi_g069237 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g01255 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Als_g12786 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g13275 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Aop_g70676 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene16526.t1 | XERICO, Aspi01Gene16526 | E3 ubiquitin ligase *(BRH) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene16999.t2 | ATL6, Aspi01Gene16999 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene56880.t1 | Aspi01Gene56880 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0091.g042816 | No alias | not classified & original description: CDS=1-813 | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s0098.g043930 | No alias | not classified & original description: CDS=29-547 | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0385.g067521 | RHA3B | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.02G105300.1 | ATL8, Ceric.02G105300 | not classified & original description: pacid=50585310... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.05G094800.1 | ATL4H, Ceric.05G094800 | not classified & original description: pacid=50578003... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.07G057500.1 | Ceric.07G057500 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
Ceric.18G057600.1 | Ceric.18G057600 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ceric.22G061600.1 | ATL2, TL2,... | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ceric.25G037000.1 | Ceric.25G037000 | not classified & original description: pacid=50594513... | 0.04 | OrthoFinder output from all 47 species | |
Cre01.g009101 | No alias | No description available | 0.01 | OrthoFinder output from all 47 species | |
Dac_g03534 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dcu_g00837 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g04499 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Dcu_g06171 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
Dcu_g42850 | XERICO | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g25304 | ATL43 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g00468 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ehy_g05299 | BRH1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01000015001 | ATL6 | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01008756001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01009096001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.06 | OrthoFinder output from all 47 species | |
GSVIVT01027769001 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.07 | OrthoFinder output from all 47 species | |
Gb_05005 | BRH1 | E3 ubiquitin-protein ligase RHA1B OS=Arabidopsis... | 0.03 | OrthoFinder output from all 47 species | |
Gb_05386 | No alias | RHA2 signal transducer of abscisic acid perception | 0.02 | OrthoFinder output from all 47 species | |
Gb_08091 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Gb_36232 | No alias | IDF1 iron uptake IRT1-ubiquitin ligase | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os01g11490.1 | LOC_Os01g11490 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os02g46600.1 | LOC_Os02g46600 | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g54830.1 | LOC_Os02g54830 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os03g05560.1 | LOC_Os03g05560 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os04g16970.1 | LOC_Os04g16970 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os04g50100.1 | LOC_Os04g50100 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
LOC_Os05g15170.1 | ATL63, TL63,... | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g34530.1 | ATL43, LOC_Os06g34530 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os07g48680.1 | LOC_Os07g48680 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
Len_g44328 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Len_g57067 | ATL4H | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g57765 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g10385 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g18046 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Lfl_g27559 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Lfl_g39367 | RHA3B | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_10436028g0020 | No alias | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
MA_111727g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
MA_229590g0010 | No alias | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
MA_462422g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
MA_55185g0010 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
MA_96368g0010 | No alias | RING-H2-class E3 ligase | 0.04 | OrthoFinder output from all 47 species | |
Msp_g16085 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.06 | OrthoFinder output from all 47 species | |
Msp_g18716 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Msp_g36544 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g05230 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g08032 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Nbi_g24535 | ATL8 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g03755 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g05275 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ore_g10421 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Ore_g43484 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Pir_g06078 | RHA3B | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g11739 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Pir_g17673 | ATL2, TL2 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Pir_g36925 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Pnu_g01184 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Pnu_g18570 | BRH1 | E3 ubiquitin ligase *(BRH) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g03072 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Ppi_g46048 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0049.g013649 | ATL4, TL4 | not classified & original description: CDS=1-891 | 0.03 | OrthoFinder output from all 47 species | |
Sam_g06931 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
Sam_g38866 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g123690.1.1 | Solyc03g123690 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Solyc04g009780.1.1 | Solyc04g009780 | Putative RING-H2 finger protein ATL71 OS=Arabidopsis... | 0.01 | OrthoFinder output from all 47 species | |
Solyc06g053640.1.1 | Solyc06g053640 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Solyc11g005290.1.1 | Solyc11g005290 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Solyc12g087840.1.1 | Solyc12g087840 | RING-H2-class E3 ligase | 0.03 | OrthoFinder output from all 47 species | |
Spa_g02165 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g17343 | ATL6 | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.01 | OrthoFinder output from all 47 species | |
Spa_g30280 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g48427 | No alias | RING-H2-class ATL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e007157_P001 | Zm00001e007157 | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e007957_P001 | ATL6, Zm00001e007957 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e008560_P001 | RHA2A, Zm00001e008560 | no hits & (original description: none) | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e009766_P001 | Zm00001e009766 | RING-H2-class E3 ligase | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e031105_P001 | Zm00001e031105 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species | |
Zm00001e031442_P001 | Zm00001e031442 | RING-H2-class E3 ligase | 0.01 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001841 | Znf_RING | 140 | 183 |
No external refs found! |