LOC_Os01g16110.1


Description : XRN4-exoribonuclease cofactor (LARP1)


Gene families : OG_01_0001423 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001423_tree ,
OG_02_0001373 (LandPlants) Phylogenetic Tree(s): OG_02_0001373_tree ,
OG_03_0006521 (SeedPlants) Phylogenetic Tree(s): OG_03_0006521_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: LOC_Os01g16110.1
Cluster HCCA: Cluster_262

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00101p00028940 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.03 Archaeplastida
AT5G21160 No alias LA RNA-binding protein 0.04 Archaeplastida
Cpa|evm.model.tig00000498.93 No alias No description available 0.02 Archaeplastida
Cre10.g441200 No alias RNA processing.RNA decay.deadenylation-dependent... 0.01 Archaeplastida
Gb_04152 No alias La-related protein 1C OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_1763g0010 No alias La-related protein 1A OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c7_8450V3.1 No alias LA RNA-binding protein 0.04 Archaeplastida
Solyc04g081820.3.1 No alias La-related protein 1C OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e025537_P001 No alias XRN4-exoribonuclease cofactor (LARP1) 0.07 Archaeplastida
AMTR_s00101p00028940 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.03 LandPlants
AT5G21160 No alias LA RNA-binding protein 0.03 LandPlants
Gb_04152 No alias La-related protein 1C OS=Arabidopsis thaliana... 0.02 LandPlants
MA_114481g0010 No alias La-related protein 1B OS=Arabidopsis thaliana... 0.02 LandPlants
MA_1763g0010 No alias La-related protein 1A OS=Arabidopsis thaliana... 0.02 LandPlants
Pp3c7_8450V3.1 No alias LA RNA-binding protein 0.03 LandPlants
Zm00001e025537_P001 No alias XRN4-exoribonuclease cofactor (LARP1) 0.04 LandPlants
AMTR_s00101p00028940 evm_27.TU.AmTr_v1... RNA processing.RNA decay.deadenylation-dependent... 0.02 SeedPlants
AT5G21160 No alias LA RNA-binding protein 0.03 SeedPlants
Zm00001e025537_P001 No alias XRN4-exoribonuclease cofactor (LARP1) 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006630 La_HTH 332 387
No external refs found!